CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77588	Canola	cytosol	85.79	75.78
Bra014884.1-P	Field mustard	cytosol	85.28	61.54
CDY47154	Canola	nucleus	70.56	60.43
CDY12465	Canola	cytosol	69.54	59.57
AT1G30550.2	Thale cress	extracellular	70.56	58.16
CDX98214	Canola	cytosol	85.28	55.26
PGSC0003DMT400032794	Potato	cytosol, mitochondrion	58.88	47.35
VIT_09s0018g01550.t01	Wine grape	cytosol	59.39	47.18
Solyc01g104990.2.1	Tomato	cytosol	57.87	47.11
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	38.58	45.78
TraesCS7A01G151900.1	Wheat	cytosol	42.13	43.68
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	53.81	40.0
OQU75980	Sorghum	mitochondrion	46.7	30.77
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	48.22	30.65
TraesCS7B01G055700.1	Wheat	cytosol, plastid	48.22	28.79
Zm00001d045079_P001	Maize	mitochondrion	47.21	27.6
CDY57504	Canola	nucleus, plastid	47.72	21.27
CDY71252	Canola	cytosol	50.76	19.3
CDY53935	Canola	cytosol	51.27	17.63
CDY53955	Canola	cytosol	34.01	14.41

Protein Annotations

KEGG:00253+2.1.1.-	KEGG:00270+2.1.1.-	KEGG:00332+2.1.1.-	KEGG:00340+2.1.1.-	KEGG:00350+2.1.1.-	KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-	KEGG:00450+2.1.1.-	KEGG:00522+2.1.1.-	KEGG:00523+2.1.1.-	KEGG:00624+2.1.1.-	KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-	KEGG:00940+2.1.1.-	KEGG:00941+2.1.1.-	KEGG:00942+2.1.1.-	KEGG:00945+2.1.1.-	KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078EWF6	EnsemblPlants:CDY05312	ProteinID:CDY05312
ProteinID:CDY05312.1	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009452	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00120143001
PFAM:PF09445	PANTHER:PTHR14741	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EECFB6
SEG:seg	:	:	:	:	:

Description

BnaC05g44910D

Coordinates

chrLK031960:-:1023352..1029114

Molecular Weight (calculated)

21463.0 Da

IEP (calculated)

4.663

GRAVY (calculated)

0.126

Length

197 amino acids

Sequence
(BLAST)

001: MVTPLSPSSH SYDEGIQIDE EGWYSVTHEE IAIKHAERCR GKVVIDCFAG VGGNTIQFAK VSSSVIAIDI DPMKVQMAMN NANVYGVANH VDFVVGDFFS
101: LAPSLKGDVS FLAPPWGGPN YCKVESFKMD MLQPRDGYSL FKIVQSITPN IIMYLPKNVD LAQLEELASL SSPPLTLEVT PLSIKTLGLG IISEPKI

Best Arabidopsis Sequence Match ( AT1G30550.2 )
(BLAST)

001: MFQSYVTFLL SYISLVFLYS TEAESLIEKE HGTNPKISRY WIQRYDLFSK YDQGIEMDEE GWYSVTPEEI AIKQAERCRG KVVIDCFSGV GGNTIQFAKV
101: CSSVIAIDID PMKIALAMNN AKVYGVANRI DFVTGDFMQL APSLKGDVLF LSPPWGGPTY SKVESYKLDM LLPRDGYSLF QTALSITPNI IMFLPKNIDL
201: AQLEELACLS SPPLTLEIEE NSIGGEIKAI TAYFSSNVV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT1G30550]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.