Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77588 | Canola | cytosol | 71.13 | 76.23 |
| AT1G30545.2 | Thale cress | mitochondrion | 74.06 | 75.97 |
| Bra026224.1-P | Field mustard | cytosol | 70.71 | 75.78 |
| CDY05312 | Canola | cytosol | 58.16 | 70.56 |
| Bra014884.1-P | Field mustard | cytosol | 69.04 | 60.44 |
| PGSC0003DMT400032794 | Potato | cytosol, mitochondrion | 57.74 | 56.33 |
| Solyc01g104990.2.1 | Tomato | cytosol | 56.9 | 56.2 |
| CDX98214 | Canola | cytosol | 70.29 | 55.26 |
| VIT_09s0018g01550.t01 | Wine grape | cytosol | 57.32 | 55.24 |
| TraesCS7A01G151900.1 | Wheat | cytosol | 39.33 | 49.47 |
| GSMUA_Achr6P30880_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 53.97 | 48.68 |
| OQU75980 | Sorghum | mitochondrion | 46.44 | 37.12 |
| TraesCS7D01G153600.1 | Wheat | mitochondrion, plastid | 46.86 | 36.13 |
| TraesCS7B01G055700.1 | Wheat | cytosol, plastid | 46.86 | 33.94 |
| Zm00001d045079_P001 | Maize | mitochondrion | 46.86 | 33.23 |
| AT1G45231.2 | Thale cress | cytosol | 49.79 | 22.12 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.2 | EntrezGene:839935 | ProteinID:AEE31243.2 | ArrayExpress:AT1G30550 | EnsemblPlantsGene:AT1G30550 |
| RefSeq:AT1G30550 | TAIR:AT1G30550 | RefSeq:AT1G30550-TAIR-G | EnsemblPlants:AT1G30550.2 | TAIR:AT1G30550.2 | UniProt:F4I6D2 |
| GO:GO:0001510 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0009452 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0032259 | RefSeq:NP_001319114.1 |
| PFAM:PF09445 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR14741 |
| InterPro:RNA_cap_Gua-N2-MeTrfase | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | SignalP:SignalP-noTM | UniParc:UPI0001A7B3E7 | : |
Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT1G30550]
Coordinates
chr1:-:10822161..10823765
Molecular Weight (calculated)
26696.2 Da
IEP (calculated)
4.378
GRAVY (calculated)
0.095
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQSYVTFLL SYISLVFLYS TEAESLIEKE HGTNPKISRY WIQRYDLFSK YDQGIEMDEE GWYSVTPEEI AIKQAERCRG KVVIDCFSGV GGNTIQFAKV
101: CSSVIAIDID PMKIALAMNN AKVYGVANRI DFVTGDFMQL APSLKGDVLF LSPPWGGPTY SKVESYKLDM LLPRDGYSLF QTALSITPNI IMFLPKNIDL
201: AQLEELACLS SPPLTLEIEE NSIGGEIKAI TAYFSSNVV
101: CSSVIAIDID PMKIALAMNN AKVYGVANRI DFVTGDFMQL APSLKGDVLF LSPPWGGPTY SKVESYKLDM LLPRDGYSLF QTALSITPNI IMFLPKNIDL
201: AQLEELACLS SPPLTLEIEE NSIGGEIKAI TAYFSSNVV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.