Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77588 | Canola | cytosol | 98.21 | 98.21 |
| Bra014884.1-P | Field mustard | cytosol | 87.89 | 71.79 |
| AT1G30550.2 | Thale cress | extracellular | 75.78 | 70.71 |
| Bra039862.1-P | Field mustard | cytosol | 71.75 | 69.57 |
| PGSC0003DMT400032794 | Potato | cytosol, mitochondrion | 59.64 | 54.29 |
| Solyc01g104990.2.1 | Tomato | cytosol | 58.3 | 53.72 |
| VIT_09s0018g01550.t01 | Wine grape | cytosol | 58.74 | 52.82 |
| TraesCS7A01G151900.1 | Wheat | cytosol | 40.81 | 47.89 |
| GSMUA_Achr6P30880_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 54.71 | 46.04 |
| TraesCS7D01G153600.1 | Wheat | mitochondrion, plastid | 48.88 | 35.16 |
| OQU75980 | Sorghum | mitochondrion | 47.09 | 35.12 |
| TraesCS7B01G055700.1 | Wheat | cytosol, plastid | 48.88 | 33.03 |
| Zm00001d045079_P001 | Maize | mitochondrion | 47.53 | 31.45 |
| Bra040262.1-P | Field mustard | cytosol | 52.47 | 20.45 |
Protein Annotations
| EnsemblPlants:Bra026224.1 | EnsemblPlants:Bra026224.1-P | EnsemblPlantsGene:Bra026224 | Gene3D:3.40.50.150 | GO:GO:0001510 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009452 |
| GO:GO:0009987 | GO:GO:0016740 | InterPro:RNA_cap_Gua-N2-MeTrfase | InterPro:SAM-dependent_MTases | PANTHER:PTHR14741 | PFAM:PF09445 |
| SEG:seg | SUPFAM:SSF53335 | UniParc:UPI0002544315 | UniProt:M4EBR5 | MapMan:35.2 | : |
Description
AT1G30550 (E=6e-087) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: WW domain-containing protein (TAIR:AT1G45231.2).
Coordinates
chrA01:+:10566559..10567657
Molecular Weight (calculated)
24896.7 Da
IEP (calculated)
4.596
GRAVY (calculated)
-0.141
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIDDQSHLK KEEENGTNPK INRYWIQRYD LFSRYDEGIQ IDEEGWYSVT HEEIAINHAE RCHGKVVIDC FAGVGGNTIQ FAKVSSSVIA IDIDPMKVQM
101: AMNNANVYGV ANHVDFVVGD FFSLAPSLKG DVSFLSPPWG GPNYCKVESF KMDMLQPRDG YSLFKIVQSI TPNIIMYLPK NVDLAQLEEL ASLSSPPLTL
201: EIEESCIGGK MIAITAYFSR NAA
101: AMNNANVYGV ANHVDFVVGD FFSLAPSLKG DVSFLSPPWG GPNYCKVESF KMDMLQPRDG YSLFKIVQSI TPNIIMYLPK NVDLAQLEEL ASLSSPPLTL
201: EIEESCIGGK MIAITAYFSR NAA
001: MFQSYVTFLL SYISLVFLYS TEAESLIEKE HGTNPKISRY WIQRYDLFSK YDQGIEMDEE GWYSVTPEEI AIKQAERCRG KVVIDCFSGV GGNTIQFAKV
101: CSSVIAIDID PMKIALAMNN AKVYGVANRI DFVTGDFMQL APSLKGDVLF LSPPWGGPTY SKVESYKLDM LLPRDGYSLF QTALSITPNI IMFLPKNIDL
201: AQLEELACLS SPPLTLEIEE NSIGGEIKAI TAYFSSNVV
101: CSSVIAIDID PMKIALAMNN AKVYGVANRI DFVTGDFMQL APSLKGDVLF LSPPWGGPTY SKVESYKLDM LLPRDGYSLF QTALSITPNI IMFLPKNIDL
201: AQLEELACLS SPPLTLEIEE NSIGGEIKAI TAYFSSNVV
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT1G30550]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.