Factsheet for VIT_18s0001g10430.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0018g01550.t01	Wine grape	cytosol	15.26	47.98
GSMUA_Achr2P00940_001	Banana	nucleus	19.74	45.7
AT1G45231.2	Thale cress	cytosol	29.49	42.75
CDY71252	Canola	cytosol	27.31	41.12
PGSC0003DMT400039918	Potato	cytosol	30.64	40.65
TraesCS1B01G467900.1	Wheat	cytosol	21.03	39.71
TraesCS1A01G432300.1	Wheat	cytosol	21.54	39.44
KRH15371	Soybean	cytosol	35.77	38.97
Bra040262.1-P	Field mustard	cytosol	27.95	38.11
CDY53935	Canola	cytosol	27.82	37.87
Solyc12g088810.1.1	Tomato	cytosol, mitochondrion	32.44	36.88
CDY53955	Canola	cytosol	21.15	35.48
KXG39199	Sorghum	cytosol	29.62	34.58
Os03t0396900-02	Rice	cytosol	30.0	33.91
Zm00001d029429_P001	Maize	cytosol	29.49	33.82
TraesCS1B01G465400.2	Wheat	cytosol	28.85	30.86
KRH05676	Soybean	endoplasmic reticulum	27.69	30.86
TraesCS1D01G439800.1	Wheat	cytosol	28.85	30.61
HORVU1Hr1G093790.4	Barley	mitochondrion	28.21	29.45
TraesCS1A01G430700.2	Wheat	cytosol	25.26	28.02

Protein Annotations

EntrezGene:100262697	wikigene:100262697	Gene3D:3.40.50.150	MapMan:35.2	ProteinID:CCB45838	ProteinID:CCB45838.1
UniProt:F6H1C9	EMBL:FN595227	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009452	GO:GO:0009987	GO:GO:0016740
GO:GO:0036261	GO:GO:0071164	InterPro:IPR001202	EntrezGene:LOC100262697	wikigene:LOC100262697	PFAM:PF09445
ScanProsite:PS01159	PFscan:PS50020	PANTHER:PTHR14741	PANTHER:PTHR14741:SF33	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI0001985487	ArrayExpress:VIT_18s0001g10430	EnsemblPlantsGene:VIT_18s0001g10430	EnsemblPlants:VIT_18s0001g10430.t01	InterPro:WW_dom
RefSeq:XP_002282801	RefSeq:XP_002282801.1	:	:	:	:

Description

No Description!

Coordinates

chr18:-:8745101..8755025

Molecular Weight (calculated)

86588.4 Da

IEP (calculated)

4.422

GRAVY (calculated)

-0.410

Length

780 amino acids

Sequence
(BLAST)

001: METQAPAITA LGSLFRLTQV SLWDDASAEV PEVSSFSRRS KPSAGDEEDE GNSDIISAAN DYNPSQEYVE LAKEMNALGL PISFHTNKEK RNAVVKGKRK
101: SKQMKHPHCD KQIEDGVLEF PKVSEGDIVS PTVFHDKTSN SLCCMSMLGK SEFSCCDIAV DVNKSQCSTG EGDDSVSLTA GTTNGATKKF ICDGNSDIMA
201: NDCPGCDFVE NDSVSKDDME TAADKMNINS ETSASCLVDA EIDCGKQEVD GRLVEFEHLD GSLVACHDAQ GEKICDDISI EQLGVPNLVL PSQSSEVIDH
301: DGIDSCESYG GFGDWRVYWD SFYMRNYFYN IKTHESTWFQ PPGMEFLLGD ITNEFSEIIP EQDYMKAVDA CGLQNIFVVS NPGDEVAGQP SNEHSVGIEL
401: DAEKSMSSMT MPDVSSCSLQ EINRNCNDKI PSCILSESDT HKCIGSLGKK LEQLDYDEVC SSDLQFMLTN RTDEMDYSEP KDGTKMIVAC EGMCKNLTNA
501: PTEAVFESWN CNMHPGYIVS AIDELDITHN SVTTKQKKKV RRMRPWKKLS NENEGFEFQG LLEDSSADIS KYWWQRYLLF SKYDDGIKMD KEGWFSVTPE
601: IIARHHASRC GSGIIVDCFT GVGGNAIQFA QRSKHVIAID IDPKKIEYAQ HNAAIYGVDD RIDFIKGDSF LLASTLKADT VFLSPPWGGP DYAKVETYDI
701: KTMLKPHDGF FLFNTVKKVA SRVVMFLPRN VDVNQLAELS LSADPPWFLE VEKNFLNGKL KAVTAYFSDT SIQKNISSFQ

Best Arabidopsis Sequence Match ( AT1G45231.2 )
(BLAST)

001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.