Factsheet for TraesCS1B01G467900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G432300.1	Wheat	cytosol	85.71	83.1
GSMUA_Achr2P00940_001	Banana	nucleus	35.84	43.92
TraesCS1B01G465400.2	Wheat	cytosol	74.09	41.98
KXG39199	Sorghum	cytosol	53.75	33.23
TraesCS7B01G055700.1	Wheat	cytosol, plastid	26.39	33.03
Zm00001d029429_P001	Maize	cytosol	53.51	32.5
Os03t0396900-02	Rice	cytosol	54.0	32.32
AT1G45231.2	Thale cress	cytosol	36.56	28.07
CDY71252	Canola	cytosol	32.69	26.06
CDY53935	Canola	cytosol	33.17	23.91
Bra040262.1-P	Field mustard	cytosol	32.93	23.78
PGSC0003DMT400039918	Potato	cytosol	32.45	22.79
Solyc12g088810.1.1	Tomato	cytosol, mitochondrion	35.84	21.57
KRH15371	Soybean	cytosol	37.05	21.37
VIT_18s0001g10430.t01	Wine grape	cytosol	39.71	21.03
CDY53955	Canola	cytosol	23.0	20.43
KRH05676	Soybean	endoplasmic reticulum	28.33	16.71

Protein Annotations

EnsemblPlants:TraesCS1B01G467900.1	EnsemblPlantsGene:TraesCS1B01G467900	Gene3D:3.40.50.150	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009452	GO:GO:0009987
GO:GO:0016740	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR14741	PANTHER:PTHR14741:SF33	PFAM:PF09445
SEG:seg	SUPFAM:SSF53335	TIGR:cd02440	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1B:-:677568881..677573046

Molecular Weight (calculated)

45948.2 Da

IEP (calculated)

4.453

GRAVY (calculated)

-0.307

Length

413 amino acids

Sequence
(BLAST)

001: MVATVTKKLQ EPRRDVDGEL SNVPAVGLEP GSLNAGPTRE SVPTVVMPPA AAEYSSMRKL GKLFKLTEVH LWDDFYVKTG DCDATETTGC TGSQTTENRN
101: KVAKTTDADH SFVEDMELAS RMADQTGDDT HLDEQRHELI YNETLSLSDI PDKELTYISV IATIDEAQHD KNMQNDSPMT EVLEMNQEVH SCPDMANMST
201: DIARYWNQRY SLFSLFDSGI KTDEEGWFSV TPELIAKHHA SRVGAGILID CFAGIGGNTI QFATKCKHVV AVDVDPQKIG YAQHNATIYG VNDHIDFIVG
301: DFINIAPHLK GETVFMSPPW GGPDYAEVDV YDIKTMLKPC DGYHLFKLAM AIASRVVMFL PRNCDLDQLA DMCLSVDPPW AVEVEKNFLN GKLKTITAYF
401: EEHVSVDVEV EHQ

Best Arabidopsis Sequence Match ( AT1G45231.2 )
(BLAST)

001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.