Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68456 | Canola | cytosol | 5.04 | 10.07 |
| CDY48662 | Canola | cytosol, nucleus, plastid | 2.16 | 6.45 |
| Solyc12g040310.1.1 | Tomato | mitochondrion | 1.44 | 6.06 |
| CDX73271 | Canola | cytosol | 5.76 | 6.04 |
| CDY14354 | Canola | nucleus | 2.52 | 4.79 |
| CDY05604 | Canola | cytosol | 14.75 | 4.77 |
| CDY33886 | Canola | cytosol | 14.75 | 4.75 |
| CDY48663 | Canola | mitochondrion | 1.44 | 3.17 |
| CDY54766 | Canola | nucleus | 0.36 | 1.08 |
| CDX86208 | Canola | cytosol | 0.72 | 0.95 |
| PGSC0003DMT400023406 | Potato | cytosol, nucleus, plastid | 0.36 | 0.89 |
Protein Annotations
| EnsemblPlants:CDY33383 | EnsemblPlantsGene:GSBRNA2T00054231001 | PANTHER:PTHR44012 | PANTHER:PTHR44012:SF1 | ProteinID:CDY33383 | ProteinID:CDY33383.1 |
| SEG:seg | UniParc:UPI0004EACD7A | UniProt:A0A078H955 | MapMan:35.1 | : | : |
Description
BnaC05g12000DBnaC05g12000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H955]
Coordinates
chrLK032312:+:377156..378789
Molecular Weight (calculated)
31036.8 Da
IEP (calculated)
4.867
GRAVY (calculated)
-0.276
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNTEESESS GSRAVVASPS QENPRHYRMK LDVLGEVLQR LQESSYEEAA LPDFEDRLWQ HFNRLPARYA LDVNVERAED VLTHLRLLKL AEDPATRPAF
101: VMYRVVLSTP TFGSSPNFEP ITPGSKLVDS AVNATLATRE LGLNIQEAHA FSTADGFSLN VFVVAGWSQE ETDGLKDALG NEILKLKKLI TKTQQTFDRA
201: LSTLPVTQHG MIWESYLVFV SQEGVPVETS LSVYRRYEDY IKLLLKSGRG LEAAENLIDV LSRVGEVGNR GTFNLCAE
101: VMYRVVLSTP TFGSSPNFEP ITPGSKLVDS AVNATLATRE LGLNIQEAHA FSTADGFSLN VFVVAGWSQE ETDGLKDALG NEILKLKKLI TKTQQTFDRA
201: LSTLPVTQHG MIWESYLVFV SQEGVPVETS LSVYRRYEDY IKLLLKSGRG LEAAENLIDV LSRVGEVGNR GTFNLCAE
001: MTIKDESESC GSRAVVASPS QENPRHYRMK LDVYSEVLQR LQESNYEEAT LPDFEDQLWL HFNRLPARYA LDVKVERAED VLTHQRLLKL AADPATRPVF
101: EVRSVQVSPR ISADSDPAVE EDAQSSHQPS GPGVLAPPTF GSSPNFEAIT QGSKIVEDVD SVVNATLSTR PMHEITFSTI DKPKLLSQLT SLLGELGLNI
201: QEAHAFSTVD GFSLDVFVVD GWSQEETDGL RDALSKEILK LKDQPGSKQK SISFFEHDKS SNELIPACIE IPTDGTDEWE IDVTQLKIEK KVASGSYGDL
301: HRGTYCSQEV AIKFLKPDRV NNEMLREFSQ EVFIMRKVRH KNVVQFLGAC TRSPTLCIVT EFMARGSIYD FLHKQKCAFK LQTLLKVALD VAKGMSYLHQ
401: NNIIHRDLKT ANLLMDEHGL VKVADFGVAR VQIESGVMTA ETGTYRWMAP EVIEHKPYNH KADVFSYAIV LWELLTGDIP YAFLTPLQAA VGVVQKGLRP
501: KIPKKTHPKV KGLLERCWHQ DPEQRPLFEE IIEMLQQIMK EVNVVV
101: EVRSVQVSPR ISADSDPAVE EDAQSSHQPS GPGVLAPPTF GSSPNFEAIT QGSKIVEDVD SVVNATLSTR PMHEITFSTI DKPKLLSQLT SLLGELGLNI
201: QEAHAFSTVD GFSLDVFVVD GWSQEETDGL RDALSKEILK LKDQPGSKQK SISFFEHDKS SNELIPACIE IPTDGTDEWE IDVTQLKIEK KVASGSYGDL
301: HRGTYCSQEV AIKFLKPDRV NNEMLREFSQ EVFIMRKVRH KNVVQFLGAC TRSPTLCIVT EFMARGSIYD FLHKQKCAFK LQTLLKVALD VAKGMSYLHQ
401: NNIIHRDLKT ANLLMDEHGL VKVADFGVAR VQIESGVMTA ETGTYRWMAP EVIEHKPYNH KADVFSYAIV LWELLTGDIP YAFLTPLQAA VGVVQKGLRP
501: KIPKKTHPKV KGLLERCWHQ DPEQRPLFEE IIEMLQQIMK EVNVVV
Arabidopsis Description
STY8Serine/threonine-protein kinase STY8 [Source:UniProtKB/Swiss-Prot;Acc:O22558]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.