Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73271 | Canola | cytosol | 25.9 | 13.58 |
| CDY48662 | Canola | cytosol, nucleus, plastid | 8.63 | 12.9 |
| Solyc03g044040.1.1 | Tomato | cytosol | 12.23 | 8.95 |
| Os01t0686600-01 | Rice | nucleus | 18.7 | 6.57 |
| GSMUA_Achr9P04370_001 | Banana | cytosol | 34.53 | 6.04 |
| CDY33886 | Canola | cytosol | 34.53 | 5.56 |
| CDY14354 | Canola | nucleus | 5.76 | 5.48 |
| CDY05604 | Canola | cytosol | 33.81 | 5.47 |
| TraesCS2B01G167600.1 | Wheat | cytosol | 35.97 | 5.36 |
| TraesCS2D01G145800.1 | Wheat | cytosol | 35.97 | 5.36 |
| TraesCS2A01G142400.1 | Wheat | cytosol, nucleus | 35.97 | 5.36 |
| HORVU2Hr1G025180.1 | Barley | cytosol | 35.25 | 5.26 |
| Os07t0644300-02 | Rice | nucleus | 34.53 | 5.16 |
| CDY33383 | Canola | cytosol | 10.07 | 5.04 |
| Os06t0235800-00 | Rice | nucleus | 28.78 | 4.99 |
| Zm00001d007043_P003 | Maize | plastid | 33.09 | 4.96 |
| EER99801 | Sorghum | cytosol, plastid | 33.09 | 4.94 |
| Zm00001d022335_P002 | Maize | plasma membrane | 33.09 | 4.93 |
| CDX86208 | Canola | cytosol | 7.19 | 4.76 |
| HORVU5Hr1G069290.1 | Barley | cytosol | 26.62 | 4.73 |
| TraesCS4B01G183500.1 | Wheat | cytosol | 25.9 | 4.66 |
| TraesCS7B01G098000.1 | Wheat | cytosol | 26.62 | 4.62 |
| EER89493 | Sorghum | cytosol | 25.9 | 4.6 |
| TraesCS7A01G192600.1 | Wheat | cytosol | 25.18 | 4.58 |
| TraesCS7D01G193900.1 | Wheat | cytosol | 25.18 | 4.52 |
| HORVU7Hr1G039410.1 | Barley | cytosol | 25.18 | 4.4 |
| CDY54766 | Canola | nucleus | 2.16 | 3.23 |
| Solyc03g044030.1.1 | Tomato | nucleus | 1.44 | 0.55 |
| CDY48663 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY68456 | EnsemblPlantsGene:GSBRNA2T00074251001 | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF5 | ProteinID:CDY68456 | ProteinID:CDY68456.1 |
| UniParc:UPI0004EF2418 | UniProt:A0A078JS41 | MapMan:35.2 | : | : | : |
Description
BnaCnng59100DBnaCnng59100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JS41]
Coordinates
chrLK037365:+:2583..3807
Molecular Weight (calculated)
16718.4 Da
IEP (calculated)
9.526
GRAVY (calculated)
-0.478
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDFLRITY YYREVEICAG IFVFKGHQLV DLRKLWVVTG MPQIILNYAF LLEENSYFED ALKVYERGVK KFKYPHVKDK VWLICRRKNK ELNKAGFPED
101: EMTSLEKQAA HDPNVCHSYT KRWWKATRVC ELRSHLKVR
101: EMTSLEKQAA HDPNVCHSYT KRWWKATRVC ELRSHLKVR
001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.