Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G192600.1 | Wheat | cytosol | 85.36 | 86.26 |
| TraesCS7D01G193900.1 | Wheat | cytosol | 86.01 | 85.68 |
| TraesCS7B01G098000.1 | Wheat | cytosol | 88.47 | 85.27 |
| HORVU7Hr1G039410.1 | Barley | cytosol | 86.14 | 83.54 |
| Os06t0235800-00 | Rice | nucleus | 68.52 | 66.04 |
| EER89493 | Sorghum | cytosol | 65.93 | 65.01 |
| CDY48662 | Canola | cytosol, nucleus, plastid | 4.53 | 37.63 |
| Solyc03g044040.1.1 | Tomato | cytosol | 9.2 | 37.37 |
| TraesCS2B01G167600.1 | Wheat | cytosol | 43.01 | 35.62 |
| KRH10763 | Soybean | cytosol | 39.12 | 32.9 |
| KRH21565 | Soybean | nucleus | 38.99 | 32.75 |
| Bra020619.1-P | Field mustard | cytosol | 38.47 | 32.53 |
| CDY33886 | Canola | cytosol | 36.27 | 32.45 |
| PGSC0003DMT400017726 | Potato | cytosol | 38.21 | 32.24 |
| GSMUA_Achr9P04370_001 | Banana | cytosol | 33.16 | 32.2 |
| Solyc01g086990.2.1 | Tomato | cytosol, nucleus | 38.08 | 32.1 |
| AT5G28740.1 | Thale cress | cytosol | 37.95 | 31.95 |
| CDY05604 | Canola | cytosol | 34.84 | 31.32 |
| VIT_00s0404g00060.t01 | Wine grape | cytosol | 33.81 | 27.53 |
| Solyc03g044030.1.1 | Tomato | nucleus | 12.82 | 27.42 |
| CDY68456 | Canola | cytosol | 4.66 | 25.9 |
| CDX73271 | Canola | cytosol | 8.68 | 25.28 |
| CDY14354 | Canola | nucleus | 4.02 | 21.23 |
| Bra003036.1-P | Field mustard | nucleus | 4.15 | 19.16 |
| CDX86208 | Canola | cytosol | 4.92 | 18.1 |
| Bra010008.1-P | Field mustard | cytosol, nucleus, plastid | 5.18 | 15.44 |
| Bra032990.1-P | Field mustard | cytosol, nucleus, plastid | 5.18 | 12.62 |
| Bra027126.1-P | Field mustard | endoplasmic reticulum, golgi | 2.2 | 11.04 |
| CDY54766 | Canola | nucleus | 1.04 | 8.6 |
| CDY48663 | Canola | mitochondrion | 1.3 | 7.94 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G183500.1 | EnsemblPlantsGene:TraesCS4B01G183500 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:HAT |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF15 | SEG:seg | SMART:SM00386 |
| SUPFAM:SSF48452 | MapMan:16.4.5.2.5 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:402946735..402950021
Molecular Weight (calculated)
86287.3 Da
IEP (calculated)
7.450
GRAVY (calculated)
-0.214
Length
772 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAMEIEVS ADDVAYEEDV LRDPFRLSGW LRYLSARRAA PPAKRAAIYE RALRALPGSY KLWHAYLTEL GDAARALPVT HAAHAGLDAA FERALAAGMS
101: RMPRVWHMYA SSLLHQRLLT RARHVLDRAL RSLPVTQHHH VWPLHLRLAS LPDCPAPTAV RVHGRHLQFD PDHEEDFIAF LVSAGRWRDA AQHLAAAIDD
201: EGFVSVKGTT KRQLLLDLCG LLAQHPEDVA GMPVDGILRG SIRKFPEEAG VLWTSLASHY ARRGLHGKAR DVFEEAMTTA TTVKDFRMVF DAYLHFEHAM
301: AAAELELCQA DAVDVQDCWL ADRDSTDLAM ARLERLLERR PELLNSVLLR QNPHDVQAWH ERAKIFHKDP ARHAATYAEA VRTVDPAKAT GKPPHTLWLA
401: LAKMYEDRGS VGCARDVLHR ATQANFTAAE HLAAVYCEWA HMELRHQDPE RAIDLIRRAT TPPSIEPTTH AAAAGGEDVR VKLHRCLKLW LVYLNLMTTH
501: GSLESTCAVY DKMHDLGVVT PLLVLDHATL LEQHGRFEDA FRVYERGVRS FKHPHADAIW EAYLTKFVQR HGKSRPERVR DLFQAAAVYL RYARFGEDFG
601: LASRAMKVYV DAASAVPASD RLGVYEVYVA RATELYGLLK ARDVYQQAIV GGGLPDEGAR AMCVGFADLE IVLGEVARAR ALYAYAAAFT DPKVYPEFWK
701: RRNDFEVLHG DEGTFREMLR MKRTMAAVAR DGAGARVGVI VVLARLNVPA PRVMNPRESG NEDVGTDGVP PN
101: RMPRVWHMYA SSLLHQRLLT RARHVLDRAL RSLPVTQHHH VWPLHLRLAS LPDCPAPTAV RVHGRHLQFD PDHEEDFIAF LVSAGRWRDA AQHLAAAIDD
201: EGFVSVKGTT KRQLLLDLCG LLAQHPEDVA GMPVDGILRG SIRKFPEEAG VLWTSLASHY ARRGLHGKAR DVFEEAMTTA TTVKDFRMVF DAYLHFEHAM
301: AAAELELCQA DAVDVQDCWL ADRDSTDLAM ARLERLLERR PELLNSVLLR QNPHDVQAWH ERAKIFHKDP ARHAATYAEA VRTVDPAKAT GKPPHTLWLA
401: LAKMYEDRGS VGCARDVLHR ATQANFTAAE HLAAVYCEWA HMELRHQDPE RAIDLIRRAT TPPSIEPTTH AAAAGGEDVR VKLHRCLKLW LVYLNLMTTH
501: GSLESTCAVY DKMHDLGVVT PLLVLDHATL LEQHGRFEDA FRVYERGVRS FKHPHADAIW EAYLTKFVQR HGKSRPERVR DLFQAAAVYL RYARFGEDFG
601: LASRAMKVYV DAASAVPASD RLGVYEVYVA RATELYGLLK ARDVYQQAIV GGGLPDEGAR AMCVGFADLE IVLGEVARAR ALYAYAAAFT DPKVYPEFWK
701: RRNDFEVLHG DEGTFREMLR MKRTMAAVAR DGAGARVGVI VVLARLNVPA PRVMNPRESG NEDVGTDGVP PN
001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.