Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G142400.1 | Wheat | cytosol, nucleus | 99.46 | 99.36 |
| TraesCS2D01G145800.1 | Wheat | cytosol | 99.14 | 99.04 |
| HORVU2Hr1G025180.1 | Barley | cytosol | 98.39 | 98.5 |
| Os07t0644300-02 | Rice | nucleus | 88.73 | 88.83 |
| EER99801 | Sorghum | cytosol, plastid | 87.34 | 87.34 |
| Zm00001d007043_P003 | Maize | plastid | 86.16 | 86.62 |
| Zm00001d022335_P002 | Maize | plasma membrane | 86.37 | 86.19 |
| GSMUA_Achr9P04370_001 | Banana | cytosol | 60.84 | 71.32 |
| Solyc03g044040.1.1 | Tomato | cytosol | 13.73 | 67.37 |
| PGSC0003DMT400017726 | Potato | cytosol | 66.09 | 67.32 |
| KRH10763 | Soybean | cytosol | 66.09 | 67.1 |
| Solyc01g086990.2.1 | Tomato | cytosol, nucleus | 65.77 | 66.92 |
| KRH21565 | Soybean | nucleus | 65.77 | 66.7 |
| CDY33886 | Canola | cytosol | 60.73 | 65.59 |
| CDY05604 | Canola | cytosol | 59.76 | 64.84 |
| AT5G28740.1 | Thale cress | cytosol | 63.73 | 64.78 |
| Bra020619.1-P | Field mustard | cytosol | 63.41 | 64.73 |
| CDY48662 | Canola | cytosol, nucleus, plastid | 6.22 | 62.37 |
| VIT_00s0404g00060.t01 | Wine grape | cytosol | 56.65 | 55.7 |
| CDX86208 | Canola | cytosol | 11.59 | 51.43 |
| CDY48663 | Canola | mitochondrion | 6.76 | 50.0 |
| Bra010008.1-P | Field mustard | cytosol, nucleus, plastid | 13.3 | 47.88 |
| TraesCS4B01G183500.1 | Wheat | cytosol | 35.62 | 43.01 |
| CDY54766 | Canola | nucleus | 3.97 | 39.78 |
| TraesCS7B01G098000.1 | Wheat | cytosol | 34.12 | 39.7 |
| Bra027126.1-P | Field mustard | endoplasmic reticulum, golgi | 6.55 | 39.61 |
| Bra032990.1-P | Field mustard | cytosol, nucleus, plastid | 13.41 | 39.43 |
| CDY68456 | Canola | cytosol | 5.36 | 35.97 |
| CDX73271 | Canola | cytosol | 9.76 | 34.34 |
| Solyc03g044030.1.1 | Tomato | nucleus | 11.16 | 28.81 |
| Bra003036.1-P | Field mustard | nucleus | 4.29 | 23.95 |
| CDY14354 | Canola | nucleus | 3.22 | 20.55 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G167600.1 | EnsemblPlantsGene:TraesCS2B01G167600 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:HAT |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF5 |
| PFscan:PS50293 | SEG:seg | SMART:SM00386 | SUPFAM:SSF48452 | MapMan:16.4.5.2.5 | : |
Description
No Description!
Coordinates
chr2B:+:140763452..140773200
Molecular Weight (calculated)
107234.0 Da
IEP (calculated)
6.101
GRAVY (calculated)
-0.521
Length
932 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSAAAGPVE VAPPAKAAAL PFAGISPDLY PTEDDLPYEE EILREPFKLK GWWRYLVARA AAPFAKRAVI YERALKALPG SYKLWHAYLR ERLDHVRPHP
101: ISHPAYASLN NTFERALATM HKMPRVWVLY LTSLLDQRLL TRGRRNFDRA LRALPVTQHD RIWPLYLRLA SLPACPVETS FRVFRRYLQF DPSHAEDFIE
201: FLVSAERWQE AADRLASVLN DDGFRSVKGK TRHQLWLELC DILTKHADEV AGLKVDAILR GGIRKFTDEV GKLWTSLADY YVRRTLYEKA RDVFEEGVSS
301: VMTVQEFSVV FEAYTQFEQS MLAAKLEAAE EDGAAESDEG EKGGRKNKVE KLEKELAACW LNDEDDTDLR LARFERLLDR RPELLSSVLL RQNPHNVEEW
401: HRRVKLFDKD PAKQVATYVE AVKTVDPMKA VGKPHTLWVA FAKMYEKHNR LDSAEDIFKK ATQVNYKAVD HLATIWCEWA EMELRNQHFD KAIELMRLAT
501: AEPSVEVKRR AAAEGDEPVQ LKLHKSLKLW SIYVDLEESL GSLETTRAVY ERILDLRIAT PQIILNYAFL LEENKYFEDA FKVYERGVKI FKYPHVKDIW
601: VTYLTKFVKR YQRSKLERAR ELFTEAVEKA PPHEKKALYL QYAKLEEDYG LAKRAMNVYD EAVRAVPNTE KMSMYEIYIA RAAELFGVPR TRQIYEQAIE
701: SGLPDKDVMV MCMKFAELER NLGEIDRSRA IYIHASNYAD PNSHPEFWKK WNDFEIQHGN EDTFREMLRI KRTVAASRSQ THFILPEYLM QRDQRLNMDE
801: AVDTLTRAGV PQDEMAALER QLASGPSPAP AAAAPSSSTT PANRMMNFVS AGVEARAESS TQQAAANNED IELPDEESDE EDDVQIAERA VPEAVFGELG
901: KRAAESREES SSAQENNEQQ LGALERIKRR RQ
101: ISHPAYASLN NTFERALATM HKMPRVWVLY LTSLLDQRLL TRGRRNFDRA LRALPVTQHD RIWPLYLRLA SLPACPVETS FRVFRRYLQF DPSHAEDFIE
201: FLVSAERWQE AADRLASVLN DDGFRSVKGK TRHQLWLELC DILTKHADEV AGLKVDAILR GGIRKFTDEV GKLWTSLADY YVRRTLYEKA RDVFEEGVSS
301: VMTVQEFSVV FEAYTQFEQS MLAAKLEAAE EDGAAESDEG EKGGRKNKVE KLEKELAACW LNDEDDTDLR LARFERLLDR RPELLSSVLL RQNPHNVEEW
401: HRRVKLFDKD PAKQVATYVE AVKTVDPMKA VGKPHTLWVA FAKMYEKHNR LDSAEDIFKK ATQVNYKAVD HLATIWCEWA EMELRNQHFD KAIELMRLAT
501: AEPSVEVKRR AAAEGDEPVQ LKLHKSLKLW SIYVDLEESL GSLETTRAVY ERILDLRIAT PQIILNYAFL LEENKYFEDA FKVYERGVKI FKYPHVKDIW
601: VTYLTKFVKR YQRSKLERAR ELFTEAVEKA PPHEKKALYL QYAKLEEDYG LAKRAMNVYD EAVRAVPNTE KMSMYEIYIA RAAELFGVPR TRQIYEQAIE
701: SGLPDKDVMV MCMKFAELER NLGEIDRSRA IYIHASNYAD PNSHPEFWKK WNDFEIQHGN EDTFREMLRI KRTVAASRSQ THFILPEYLM QRDQRLNMDE
801: AVDTLTRAGV PQDEMAALER QLASGPSPAP AAAAPSSSTT PANRMMNFVS AGVEARAESS TQQAAANNED IELPDEESDE EDDVQIAERA VPEAVFGELG
901: KRAAESREES SSAQENNEQQ LGALERIKRR RQ
001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.