Factsheet for Solyc03g044030.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g086990.2.1	Tomato	cytosol, nucleus	43.21	17.03
AT5G28740.1	Thale cress	cytosol	34.35	13.52
CDY33886	Canola	cytosol	32.13	13.44
Bra020619.1-P	Field mustard	cytosol	33.52	13.25
TraesCS4B01G183500.1	Wheat	cytosol	27.42	12.82
TraesCS7A01G192600.1	Wheat	cytosol	26.87	12.7
TraesCS7D01G193900.1	Wheat	cytosol	26.87	12.52
Os06t0235800-00	Rice	nucleus	27.7	12.48
HORVU7Hr1G039410.1	Barley	cytosol	27.42	12.44
HORVU5Hr1G069290.1	Barley	cytosol	26.87	12.4
EER89493	Sorghum	cytosol	26.04	12.01
TraesCS7B01G098000.1	Wheat	cytosol	26.59	11.98
EER99801	Sorghum	cytosol, plastid	30.47	11.8
Zm00001d022335_P002	Maize	plasma membrane	30.47	11.78
Zm00001d007043_P003	Maize	plastid	30.19	11.76
CDY05604	Canola	cytosol	27.15	11.41
Os07t0644300-02	Rice	nucleus	29.36	11.39
HORVU2Hr1G025180.1	Barley	cytosol	29.09	11.28
TraesCS2B01G167600.1	Wheat	cytosol	28.81	11.16
TraesCS2A01G142400.1	Wheat	cytosol, nucleus	28.81	11.15
TraesCS2D01G145800.1	Wheat	cytosol	28.81	11.15
GSMUA_Achr9P04370_001	Banana	cytosol	22.71	10.31
Os01t0686600-01	Rice	nucleus	4.71	4.29
Bra027126.1-P	Field mustard	endoplasmic reticulum, golgi	0.83	1.95
CDY68456	Canola	cytosol	0.55	1.44
Solyc03g044040.1.1	Tomato	cytosol	0.0	0.0
Solyc12g040310.1.1	Tomato	mitochondrion	0.0	0.0
CDY54766	Canola	nucleus	0.0	0.0
CDY48663	Canola	mitochondrion	0.0	0.0
CDY48662	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc03g044030.1.1	EnsemblPlantsGene:Solyc03g044030.1	GO:GO:0000349	GO:GO:0000974	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0071010	GO:GO:0071012	GO:GO:0071013	GO:GO:0071014	PANTHER:PTHR11246
PANTHER:PTHR11246:SF5	SEG:seg	UniParc:UPI000276816B	UniProt:K4BG23	MapMan:35.2	:

Description

No Description!

Coordinates

chr3:+:7838077..7839308

Molecular Weight (calculated)

41383.1 Da

IEP (calculated)

5.500

GRAVY (calculated)

-0.473

Length

361 amino acids

Sequence
(BLAST)

001: MNICSKCYKD MISKKEQANF TTSSIDRFVN GSSSASVKAV DVVVTVQEGP AESLVIPTQV AAPVENVQVE KAKEGPNRCS TCRRQVSLQA LPVKYKIWHA
101: YLLNAGVSLE SSNQPLPVPS SKQHFRESAC YNAQNAMALD HVLGEFNSTE ACYTNYMHFD TSLRALPITQ HDRIWEHYLM FVSQRGIPIE TSLWVCRRYL
201: KYNPSHIDDL LEFLLNYELF QEAAKRLAGV LNDDRFSSIK GKTKHRRKLV EKARDIFEEG MTTVVTVKDF SVMLDAYSQF EESMLALKME EMSDSEVKDE
301: GSNGEIRVEK DVDEEDDWSN LAKWEKKLKE FRLNDDKDID LRLASLEHLM DRRPELVNNV F

Best Arabidopsis Sequence Match ( AT5G28740.1 )
(BLAST)

001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.