Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G193900.1 | Wheat | cytosol | 84.67 | 86.97 |
| TraesCS4B01G183500.1 | Wheat | cytosol | 83.54 | 86.14 |
| TraesCS7A01G192600.1 | Wheat | cytosol | 82.16 | 85.6 |
| TraesCS7B01G098000.1 | Wheat | cytosol | 81.28 | 80.77 |
| HORVU5Hr1G069290.1 | Barley | cytosol | 68.22 | 69.44 |
| Os06t0235800-00 | Rice | nucleus | 67.46 | 67.04 |
| EER89493 | Sorghum | cytosol | 65.2 | 66.28 |
| CDY48662 | Canola | cytosol, nucleus, plastid | 5.03 | 43.01 |
| Solyc03g044040.1.1 | Tomato | cytosol | 9.3 | 38.95 |
| HORVU2Hr1G025180.1 | Barley | cytosol | 43.59 | 37.27 |
| KRH10763 | Soybean | cytosol | 38.69 | 33.55 |
| KRH21565 | Soybean | nucleus | 38.57 | 33.41 |
| Bra020619.1-P | Field mustard | cytosol | 37.81 | 32.97 |
| CDY33886 | Canola | cytosol | 35.68 | 32.91 |
| AT5G28740.1 | Thale cress | cytosol | 37.81 | 32.82 |
| GSMUA_Achr9P04370_001 | Banana | cytosol | 32.54 | 32.58 |
| PGSC0003DMT400017726 | Potato | cytosol | 37.44 | 32.57 |
| Solyc01g086990.2.1 | Tomato | cytosol, nucleus | 37.31 | 32.42 |
| CDY05604 | Canola | cytosol | 34.3 | 31.78 |
| Solyc03g044030.1.1 | Tomato | nucleus | 12.44 | 27.42 |
| VIT_00s0404g00060.t01 | Wine grape | cytosol | 32.54 | 27.32 |
| CDY68456 | Canola | cytosol | 4.4 | 25.18 |
| CDX73271 | Canola | cytosol | 8.29 | 24.91 |
| CDY14354 | Canola | nucleus | 4.15 | 22.6 |
| Bra003036.1-P | Field mustard | nucleus | 4.65 | 22.16 |
| CDX86208 | Canola | cytosol | 4.4 | 16.67 |
| Bra010008.1-P | Field mustard | cytosol, nucleus, plastid | 4.52 | 13.9 |
| Bra032990.1-P | Field mustard | cytosol, nucleus, plastid | 4.52 | 11.36 |
| Bra027126.1-P | Field mustard | endoplasmic reticulum, golgi | 2.14 | 11.04 |
| CDY54766 | Canola | nucleus | 0.88 | 7.53 |
| CDY48663 | Canola | mitochondrion | 1.01 | 6.35 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G039410.1 | EnsemblPlantsGene:HORVU7Hr1G039410 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:HAT |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF15 | SEG:seg | SMART:SM00386 |
| SUPFAM:SSF48452 | UniParc:UPI000B474745 | UniProt:A0A287W5J3 | MapMan:16.4.5.2.5 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:103213068..103215544
Molecular Weight (calculated)
89410.4 Da
IEP (calculated)
7.453
GRAVY (calculated)
-0.220
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAMEIEVS ADDVVYEEDV LRDPFRLSGW LRYLSGRVAA PPAKRAAIYE RALRALPGSY KLWHAYLTEL GDAARALPVT HAAHAGLNAT FERALAAGMS
101: RMPRLWHMYA SSLLQQRLLT RARRVLDRAL RSLPVTQHHR VWPLHLRLAS LPDCPAPTAL RMHGRHLQFD PDHAEEFIAF LVSAGRWRDA AHHLATAIDD
201: EGFVSVKGRT KRELLLDLCG LLAQHPEEVA GMPVDAILRG SIRKFPEEAS MLWTCLASHY ARRGLHGKAR DVFEEATTTA TTVKDFRMVF DAYLHFEHAM
301: AAAELELGQA DTVDVQDCWL ADRDSTDLTM ARLERLLERR PELLNSVLLR QNPHDVQAWH ERAKIFHKDP ARHAATYVEA VKTVDPAKAT GKPPHTLWLA
401: LTKMYEDRGS ADCARDVLHR ATQANFTAAE HLAAVYCEWA NMELKHQNPE TAIDLIRQAT MPPSIEATMR TAAAGGEDVR AKLHRCLKLW LVYLDLMTTH
501: GSLESTCAVY DKMHDLGVIT PLLVLDHATL LEQHRRFEDA FRVYERGVRS FKHPHADAIW EAYLTKFVQR HGESRPERVR DLFQAAVLQA PPGRKKAVYL
601: RYARFEEDFG LASRAMKVYE DAASAVPADD KLCVYEVYIA RATELCGLLK ARDVYRQAVV GGGLPDEGAR AMCVGFADLE IGLGEVARAR ALYVHAASFT
701: DPEVCPEFWK RWNDFEVLNG DESTFREMLR AKRTMAAVAR DGAGTRRAIG TDGRLVECAG QRLDCAQQCK RILRVCAISG SLMYVLTFLS TLSGEM
101: RMPRLWHMYA SSLLQQRLLT RARRVLDRAL RSLPVTQHHR VWPLHLRLAS LPDCPAPTAL RMHGRHLQFD PDHAEEFIAF LVSAGRWRDA AHHLATAIDD
201: EGFVSVKGRT KRELLLDLCG LLAQHPEEVA GMPVDAILRG SIRKFPEEAS MLWTCLASHY ARRGLHGKAR DVFEEATTTA TTVKDFRMVF DAYLHFEHAM
301: AAAELELGQA DTVDVQDCWL ADRDSTDLTM ARLERLLERR PELLNSVLLR QNPHDVQAWH ERAKIFHKDP ARHAATYVEA VKTVDPAKAT GKPPHTLWLA
401: LTKMYEDRGS ADCARDVLHR ATQANFTAAE HLAAVYCEWA NMELKHQNPE TAIDLIRQAT MPPSIEATMR TAAAGGEDVR AKLHRCLKLW LVYLDLMTTH
501: GSLESTCAVY DKMHDLGVIT PLLVLDHATL LEQHRRFEDA FRVYERGVRS FKHPHADAIW EAYLTKFVQR HGESRPERVR DLFQAAVLQA PPGRKKAVYL
601: RYARFEEDFG LASRAMKVYE DAASAVPADD KLCVYEVYIA RATELCGLLK ARDVYRQAVV GGGLPDEGAR AMCVGFADLE IGLGEVARAR ALYVHAASFT
701: DPEVCPEFWK RWNDFEVLNG DESTFREMLR AKRTMAAVAR DGAGTRRAIG TDGRLVECAG QRLDCAQQCK RILRVCAISG SLMYVLTFLS TLSGEM
001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.