Factsheet for HORVU2Hr1G025180.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G167600.1	Wheat	cytosol	98.5	98.39
TraesCS2A01G142400.1	Wheat	cytosol, nucleus	98.5	98.29
TraesCS2D01G145800.1	Wheat	cytosol	98.17	97.96
Os07t0644300-02	Rice	nucleus	88.4	88.4
EER99801	Sorghum	cytosol, plastid	87.11	87.02
Zm00001d007043_P003	Maize	plastid	86.04	86.41
Zm00001d022335_P002	Maize	plasma membrane	86.04	85.76
GSMUA_Achr9P04370_001	Banana	cytosol	60.69	71.07
PGSC0003DMT400017726	Potato	cytosol	65.95	67.1
KRH10763	Soybean	cytosol	65.84	66.78
Solyc01g086990.2.1	Tomato	cytosol, nucleus	65.63	66.7
Solyc03g044040.1.1	Tomato	cytosol	13.53	66.32
KRH21565	Soybean	nucleus	65.41	66.27
CDY33886	Canola	cytosol	60.69	65.47
Bra020619.1-P	Field mustard	cytosol	63.27	64.51
CDY05604	Canola	cytosol	59.51	64.49
AT5G28740.1	Thale cress	cytosol	63.37	64.34
CDY48662	Canola	cytosol, nucleus, plastid	6.12	61.29
VIT_00s0404g00060.t01	Wine grape	cytosol	56.71	55.7
CDX86208	Canola	cytosol	11.39	50.48
CDY48663	Canola	mitochondrion	6.77	50.0
Bra010008.1-P	Field mustard	cytosol, nucleus, plastid	13.21	47.49
HORVU7Hr1G039410.1	Barley	cytosol	37.27	43.59
HORVU5Hr1G069290.1	Barley	cytosol	36.09	42.97
CDY54766	Canola	nucleus	3.97	39.78
Bra027126.1-P	Field mustard	endoplasmic reticulum, golgi	6.55	39.61
Bra032990.1-P	Field mustard	cytosol, nucleus, plastid	13.32	39.12
CDY68456	Canola	cytosol	5.26	35.25
CDX73271	Canola	cytosol	9.77	34.34
Solyc03g044030.1.1	Tomato	nucleus	11.28	29.09
Bra003036.1-P	Field mustard	nucleus	4.3	23.95
CDY14354	Canola	nucleus	3.22	20.55

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.4.5.2.5	EMBL:AK364817	ncoils:Coil	UniProt:F2DLP9	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	InterPro:HAT	EnsemblPlantsGene:HORVU2Hr1G025180	EnsemblPlants:HORVU2Hr1G025180.1	InterPro:IPR011990	InterPro:IPR013026
PFscan:PS50293	PANTHER:PTHR11246	PANTHER:PTHR11246:SF5	SMART:SM00386	SUPFAM:SSF48452	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002006920	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DLP9]

Coordinates

chrchr2H:+:78366495..78375408

Molecular Weight (calculated)

107220.0 Da

IEP (calculated)

6.099

GRAVY (calculated)

-0.523

Length

931 amino acids

Sequence
(BLAST)

001: MPSAAAGPVE VAPPAKAAAL PFAGISPDLY PTEDDLPYEE EILREPFKLK GWWRYLVARA SAPFAKRAVI YERALKALPG SYKLWHAYLR ERLDHVRPHP
101: ISHPAYASLN NTFERALATM HKMPRVWVLY LTSLLDQRLL TRGRRNFDRA LRALPVTQHD RIWPLYLRLA SLPACPVETS FRVFRRYLQF DPSHAEDFIE
201: FLVSAERWQE AADRLASVLN DDGFRSVKGK TRHQLWLELC DILTKHADEV AGLKVDAILR GGIRKFTDEV GKLWTSLADY YVRRTLYEKA RDVFEEGVAS
301: VMTVQEFSVV FEAYTQFEQS MLAAKLEAAE EDGAVESDDG EKGGKKNKVD KLEKELAACW LNDEDDTDLR LARFERLLDR RPELLSSVLL RQNPHNVEEW
401: HRRVKLFDKD PARQVATYVE AVKTVDPMKA VGKPHTLWVA FAKMYEKHNR LDSAEDIFKK ATQVNYKAVD HLATIWCEWA EMELRNQHFD KAIELMRLAT
501: AEPSVEVKRR AAAEGDQPVQ LKLHKSLKLW SIYVDLEESL GSLETTRAVY ERILDLRIAT PQIILNYAFL LEENKYFEDA FKVYERGVKI FKYPHVKDIW
601: VTYLTKFVTR YQRSKLERAR ELFTEAVEKA PPHEKKALYL QYAKLEEDYG LAKRAMNVYD EAVRAVPNTE KMSMYEIYIA RAAELFGVPR TRQIYEQAIE
701: SGLPDKDVMV MCMKFAELER NLGEIDRSRA IYIHASNYAD PNAHPEFWKK WNDFEIQHGN EDTFREMLRI KRTVAASRSQ THFILPEYLM QRDQRLNMDE
801: AVDTLTRAGV PQDEMAALER QLASGPSPAP AAAPSTSTTP ANRMMNFVSA GVEARAESST QQTTANNEDI ELPDEESDEE DDVQIAERAV PEAVFGELGK
901: RAAESREESS NAQENNEQQL GALERIKRRR Q

Best Arabidopsis Sequence Match ( AT5G28740.1 )
(BLAST)

001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.