Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99801 | Sorghum | cytosol, plastid | 96.66 | 96.14 |
| Zm00001d022335_P002 | Maize | plasma membrane | 95.58 | 94.86 |
| Os07t0644300-02 | Rice | nucleus | 89.86 | 89.47 |
| TraesCS2A01G142400.1 | Wheat | cytosol, nucleus | 86.84 | 86.28 |
| TraesCS2B01G167600.1 | Wheat | cytosol | 86.62 | 86.16 |
| HORVU2Hr1G025180.1 | Barley | cytosol | 86.41 | 86.04 |
| TraesCS2D01G145800.1 | Wheat | cytosol | 86.52 | 85.96 |
| GSMUA_Achr9P04370_001 | Banana | cytosol | 61.27 | 71.45 |
| KRH10763 | Soybean | cytosol | 67.21 | 67.86 |
| KRH21565 | Soybean | nucleus | 66.77 | 67.36 |
| PGSC0003DMT400017726 | Potato | cytosol | 66.45 | 67.32 |
| Solyc01g086990.2.1 | Tomato | cytosol, nucleus | 66.13 | 66.92 |
| CDY33886 | Canola | cytosol | 61.49 | 66.05 |
| Solyc03g044040.1.1 | Tomato | cytosol | 13.48 | 65.79 |
| CDY05604 | Canola | cytosol | 60.63 | 65.42 |
| AT5G28740.1 | Thale cress | cytosol | 64.51 | 65.21 |
| Bra020619.1-P | Field mustard | cytosol | 64.19 | 65.17 |
| CDY48662 | Canola | cytosol, nucleus, plastid | 5.83 | 58.06 |
| VIT_00s0404g00060.t01 | Wine grape | cytosol | 58.79 | 57.49 |
| CDY48663 | Canola | mitochondrion | 7.01 | 51.59 |
| CDX86208 | Canola | cytosol | 11.54 | 50.95 |
| Bra010008.1-P | Field mustard | cytosol, nucleus, plastid | 13.7 | 49.03 |
| CDY54766 | Canola | nucleus | 4.31 | 43.01 |
| Bra027126.1-P | Field mustard | endoplasmic reticulum, golgi | 6.9 | 41.56 |
| Bra032990.1-P | Field mustard | cytosol, nucleus, plastid | 13.7 | 40.06 |
| CDY68456 | Canola | cytosol | 4.96 | 33.09 |
| CDX73271 | Canola | cytosol | 9.06 | 31.7 |
| Solyc03g044030.1.1 | Tomato | nucleus | 11.76 | 30.19 |
| Bra003036.1-P | Field mustard | nucleus | 3.78 | 20.96 |
| CDY14354 | Canola | nucleus | 2.7 | 17.12 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.4.5.2.5 | UniProt:A0A1D6F2G7 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:HAT |
| InterPro:IPR002885 | InterPro:IPR011990 | ProteinID:ONM25625.1 | ProteinID:ONM25629.1 | PFAM:PF01535 | PANTHER:PTHR11246 |
| PANTHER:PTHR11246:SF5 | InterPro:Pentatricopeptide_repeat | SMART:SM00386 | SUPFAM:SSF48452 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0008444357 |
| EnsemblPlantsGene:Zm00001d007043 | EnsemblPlants:Zm00001d007043_P003 | EnsemblPlants:Zm00001d007043_T003 | SEG:seg | : | : |
Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Coordinates
chr2:-:220739388..220744668
Molecular Weight (calculated)
106229.0 Da
IEP (calculated)
6.560
GRAVY (calculated)
-0.517
Length
927 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSTSGPVAV ASASASAKAA PSPDVGISPD LYPSEDDLAY EEEILREPFK LKGWWRYLVA RAAAPFAKRA VIYERALKAL PGSYKLWHAY LRDRLDHARP
101: HPIDHPAYSS LNNTFERALA TMHKMPRVWV LYLTSLLDQR LLTRARRAFD RALRALPVTQ HDRIWPLYLR LASLPACPVE TSLRVFRRYL QFDPSHAEDF
201: INFLVSTNHW QEAANRLASV LNDDGFRSVK GKTRHQLWLE LCDILTKHAD EVAGLKVDAI LRGGIRKFTD EVGKLWTSLA DYYVRRGLFE KARDVFEEGV
301: SSVVTVKEFS VVFEAYTQFE QSMLAAKLEA AEEEGAEDVN EGGGKKSGID NLSKKFLDGF WLNDEDDTDL RMARFERLLD RRPELLSSVL LRQNPHNVEE
401: WHRRVKLFEK DPARQVATYV EAVKTVDPMK AVGKPHTLWV AFAKMYEKHN RLDSAEDIFK RATQVNYKAV DHLASIWCEW AEMELRHNNF DKAIELMRQA
501: TAEPSVEVKR RAAAEGDEPV QMKVHKSLKL WSFYVDLEES LGTLDSTRVV YERILDLRIA TPQIILNYAY LLEEHKYFED AFKVYERGVK IFKYPHVKAI
601: WVTYLTKFVH RYKRSKLERA RELFHEAVQQ APPEEKKPLY LQWAKLEEDY GLAKRAMNVY DESVRAVPGS EKMAMYEIYI ARAAELFGVP RTRQIYEQAI
701: ESGLPDKDVL TMCMKFAELE RSLGEIDRSR AIYVHASNYA DPNNPDFWKK WNDFEIQHGN EDTFREMLRI KRTVAASRSQ THFILPEYLM QKDHRLNLDE
801: AVDTLKRAGV PEDEMAALER QLAPGPSTAP AATPTAPASA NRTMNFVSAG VEAQADSSRQ QAGNNEDIEL PDESDDEEPD VQIAEKSVPA AVFGELGKRA
901: AEKNEESSGA QGNEQLGALE RIKRRRQ
101: HPIDHPAYSS LNNTFERALA TMHKMPRVWV LYLTSLLDQR LLTRARRAFD RALRALPVTQ HDRIWPLYLR LASLPACPVE TSLRVFRRYL QFDPSHAEDF
201: INFLVSTNHW QEAANRLASV LNDDGFRSVK GKTRHQLWLE LCDILTKHAD EVAGLKVDAI LRGGIRKFTD EVGKLWTSLA DYYVRRGLFE KARDVFEEGV
301: SSVVTVKEFS VVFEAYTQFE QSMLAAKLEA AEEEGAEDVN EGGGKKSGID NLSKKFLDGF WLNDEDDTDL RMARFERLLD RRPELLSSVL LRQNPHNVEE
401: WHRRVKLFEK DPARQVATYV EAVKTVDPMK AVGKPHTLWV AFAKMYEKHN RLDSAEDIFK RATQVNYKAV DHLASIWCEW AEMELRHNNF DKAIELMRQA
501: TAEPSVEVKR RAAAEGDEPV QMKVHKSLKL WSFYVDLEES LGTLDSTRVV YERILDLRIA TPQIILNYAY LLEEHKYFED AFKVYERGVK IFKYPHVKAI
601: WVTYLTKFVH RYKRSKLERA RELFHEAVQQ APPEEKKPLY LQWAKLEEDY GLAKRAMNVY DESVRAVPGS EKMAMYEIYI ARAAELFGVP RTRQIYEQAI
701: ESGLPDKDVL TMCMKFAELE RSLGEIDRSR AIYVHASNYA DPNNPDFWKK WNDFEIQHGN EDTFREMLRI KRTVAASRSQ THFILPEYLM QKDHRLNLDE
801: AVDTLKRAGV PEDEMAALER QLAPGPSTAP AATPTAPASA NRTMNFVSAG VEAQADSSRQ QAGNNEDIEL PDESDDEEPD VQIAEKSVPA AVFGELGKRA
901: AEKNEESSGA QGNEQLGALE RIKRRRQ
001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.