CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21565	Soybean	nucleus	97.49	97.39
Solyc01g086990.2.1	Tomato	cytosol, nucleus	81.48	81.66
PGSC0003DMT400017726	Potato	cytosol	81.37	81.64
AT5G28740.1	Thale cress	cytosol	77.89	77.97
GSMUA_Achr9P04370_001	Banana	cytosol	65.14	75.22
VIT_00s0404g00060.t01	Wine grape	cytosol	74.62	72.26
Os07t0644300-02	Rice	nucleus	68.52	67.56
Zm00001d007043_P003	Maize	plastid	67.86	67.21
EER99801	Sorghum	cytosol, plastid	67.76	66.74
Zm00001d022335_P002	Maize	plasma membrane	67.65	66.49
TraesCS2D01G145800.1	Wheat	cytosol	67.43	66.35
TraesCS2A01G142400.1	Wheat	cytosol, nucleus	67.32	66.24
TraesCS2B01G167600.1	Wheat	cytosol	67.1	66.09
HORVU2Hr1G025180.1	Barley	cytosol	66.78	65.84
CDX86208	Canola	cytosol	12.31	53.81
Bra010008.1-P	Field mustard	cytosol, nucleus, plastid	15.03	53.28
Bra032990.1-P	Field mustard	cytosol, nucleus, plastid	15.36	44.48
EER89493	Sorghum	cytosol	34.31	40.23
Os06t0235800-00	Rice	nucleus	34.75	39.83
TraesCS4B01G183500.1	Wheat	cytosol	32.9	39.12
HORVU7Hr1G039410.1	Barley	cytosol	33.55	38.69
TraesCS7A01G192600.1	Wheat	cytosol	32.03	38.48
TraesCS7D01G193900.1	Wheat	cytosol	32.24	38.19
HORVU5Hr1G069290.1	Barley	cytosol	32.14	37.72
TraesCS7B01G098000.1	Wheat	cytosol	31.15	35.71
Os01t0686600-01	Rice	nucleus	13.18	30.56

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100810456	MapMan:16.4.5.2.5	EMBL:ACUP02009157	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G068100
GO:GO:0000349	GO:GO:0000974	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006396	GO:GO:0006397
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0071010	GO:GO:0071012
GO:GO:0071013	GO:GO:0071014	InterPro:HAT	UniProt:I1MEB0	InterPro:IPR011990	InterPro:IPR013026
ProteinID:KRH10762.1	EnsemblPlants:KRH10763	ProteinID:KRH10763	ProteinID:KRH10763.1	PFAM:PF05843	PFscan:PS50293
PANTHER:PTHR11246	PANTHER:PTHR11246:SF5	SMART:SM00386	SUPFAM:SSF48452	InterPro:Suf	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	UniParc:UPI000233BB62	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:5200760..5206464

Molecular Weight (calculated)

107572.0 Da

IEP (calculated)

5.668

GRAVY (calculated)

-0.569

Length

918 amino acids

Sequence
(BLAST)

001: MAIAQDLYPS EDDLLYEEEL LRNPFSLKLW WRYLIARSEA PFKKRFVIYE RALKALPGSY KLWHAYLRER LDLVRNLPVT HSQYDTLNNT FERALVTMHK
101: MPRIWIMYLK TLTNQKLVTR TRRTFDRALC ALPVTQHDRI WEPYLLFVSQ KGIPIETSLR VYRRYLKYDP SHIEDFIEFL LNSSLWQEAS ERLASVLNDD
201: QFYSIKGKTK HRLWLELCDL LTRHANEVSG LNVDAIIRGG IRKFTDEVGR LWTSLAEYYI RRGLHEKARD VFEEGMSTVI TVRDFSVIFD SYSQFEESML
301: AYKMEEMGLS DEEGDEEEGE ESGVEEGDEE DIRFKGRLVE EDFERKILHG FWLNDKKDID LRLARFDYLM ERRPELANSV LLRQNPHNVE QWHRRVKLFE
401: GNPTKQILTY TEAVRTIDPM KAVGKPHTLW VAFAKLYEQH KDLANARVIF DKAVQVNYKT VDNLASVWCE WAEMELKYKN FNGALELMRR ATAEPSVEVK
501: RRVAADGNEP VQMKLHKSLR LWTFYVDLEE SLGTLESTCA VYERILDLRI ATPQIIINYA YFLEEHKYFE DAFKVYERGV KIFKYPHVKD IWVTYLSKFV
601: RRYGKNKLER ARELFENAVE SAPADQVKPL YLQYAKLEED YGLAKRAMKV YDQATKAVPN NEKLSMYEIY IARAAEIFGV PKTREIYEQA IESGLPDKDV
701: KTMCLKYAEL EKSLGEIDRA RGIFVFASQF ADPRSDPEFW NKWHEFEVLH GNEDTFREML RIKRSVSASY SQTHFILPEY LMQKDQTVNL DEAKDKLKQA
801: GIPEDEMAAL ERQLAPAVDN TVTKDRKVGF VSAGVESQCD RGVKTSANHE DIELPEESDS DDDDKIEIAQ KDVPSAVFGG LIRKRDENEN NGEVDVTKDK
901: DNENRLGALE RIKRLRQN

Best Arabidopsis Sequence Match ( AT5G28740.1 )
(BLAST)

001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.