Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G039410.1 | Barley | cytosol | 69.44 | 68.22 |
| Os06t0235800-00 | Rice | nucleus | 66.37 | 64.79 |
| EER89493 | Sorghum | cytosol | 64.07 | 63.98 |
| CDY48662 | Canola | cytosol, nucleus, plastid | 4.99 | 41.94 |
| HORVU2Hr1G025180.1 | Barley | cytosol | 42.97 | 36.09 |
| Solyc03g044040.1.1 | Tomato | cytosol | 8.18 | 33.68 |
| GSMUA_Achr9P04370_001 | Banana | cytosol | 32.99 | 32.45 |
| KRH10763 | Soybean | cytosol | 37.72 | 32.14 |
| KRH21565 | Soybean | nucleus | 37.6 | 31.99 |
| PGSC0003DMT400017726 | Potato | cytosol | 37.08 | 31.69 |
| Solyc01g086990.2.1 | Tomato | cytosol, nucleus | 36.96 | 31.55 |
| AT5G28740.1 | Thale cress | cytosol | 36.83 | 31.41 |
| Bra020619.1-P | Field mustard | cytosol | 36.45 | 31.22 |
| CDY33886 | Canola | cytosol | 34.14 | 30.94 |
| CDY05604 | Canola | cytosol | 32.99 | 30.03 |
| Solyc03g044030.1.1 | Tomato | nucleus | 12.4 | 26.87 |
| CDY68456 | Canola | cytosol | 4.73 | 26.62 |
| CDX73271 | Canola | cytosol | 8.95 | 26.42 |
| VIT_00s0404g00060.t01 | Wine grape | cytosol | 31.71 | 26.16 |
| Bra003036.1-P | Field mustard | nucleus | 4.86 | 22.75 |
| CDY14354 | Canola | nucleus | 4.09 | 21.92 |
| CDX86208 | Canola | cytosol | 4.48 | 16.67 |
| Bra010008.1-P | Field mustard | cytosol, nucleus, plastid | 4.73 | 14.29 |
| Bra032990.1-P | Field mustard | cytosol, nucleus, plastid | 4.6 | 11.36 |
| Bra027126.1-P | Field mustard | endoplasmic reticulum, golgi | 2.05 | 10.39 |
| CDY54766 | Canola | nucleus | 0.9 | 7.53 |
| CDY48663 | Canola | mitochondrion | 0.9 | 5.56 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G069290.1 | EnsemblPlantsGene:HORVU5Hr1G069290 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:HAT |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR11246 | PANTHER:PTHR11246:SF15 | SEG:seg | SMART:SM00386 |
| SUPFAM:SSF48452 | UniParc:UPI000B46BF7F | UniProt:A0A287RNP3 | MapMan:16.4.5.2.5 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:521952519..521955026
Molecular Weight (calculated)
88962.1 Da
IEP (calculated)
8.050
GRAVY (calculated)
-0.263
Length
782 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIAMEIVIS AEDVAFEEDV LREPFKLSSW VRYLLARRAA TPGKRAVIYE RALRALPGSY KLWHAYLTEL TDGAHALPVT DRAHANLNAT FERALAAGMS
101: RMPRVWHMYA SSLLHQRELT NARRALNRAL RSLPVTQHHH VWPLLLRLAS LPGCPAPTTH RVLRRHLQFD PDQAEDFIAF LVSDGRWKDA AEHLVEVIND
201: DGFVSAKGKS KRQLLLDLCG LLAQHPEEVA GLPLPVDSIL VGSIHKFPDE AGVLWTSLAS HYARMSMHDK ARDVFEEGIT TATTVKDFRM VFEACVHFEH
301: ALIAVQLDER VQEESPLDVV QDCWLVDRDN ADMTMARLER LLERRPELLN SVLLRQNPHD VQAWHERAKI FDKDPARQAA TYVQAVKTVD PTKATGKPHT
401: LWLALAKMYA NDGLVDSARL VFQRATRVNF KAVDHLATIY CQWAQMEVMQ QQPERAIDLI RQATSQPSVD ASSRAAAAVG NEPLQMKLHR SQKLWCMYLD
501: LMKTHASFES ICAVYDRMHD VGIITPLLVL NHASLLEEHK RFEDAFRVYE RGVNSFKSPH SDAIWEAYLT KFVHRNGNSR PERVRDMFAS ALLQAPPKKK
601: KALYLEYAKY EEVFGLVTRA MKIYEDAASA VPACDRLDVY EVYILRATQF CGLVKVRNIY SQAIHSDLLD KDARAMCIKF ADLEIGLGEV ARARALYAYV
701: SSFTDPKAHP GFWKRWNDFE VSHGDETTFR EMLRMKRTMT AAASAIEMDA IRAAPKRSLC PCARQQLDHE GIDEQRKRRC LA
101: RMPRVWHMYA SSLLHQRELT NARRALNRAL RSLPVTQHHH VWPLLLRLAS LPGCPAPTTH RVLRRHLQFD PDQAEDFIAF LVSDGRWKDA AEHLVEVIND
201: DGFVSAKGKS KRQLLLDLCG LLAQHPEEVA GLPLPVDSIL VGSIHKFPDE AGVLWTSLAS HYARMSMHDK ARDVFEEGIT TATTVKDFRM VFEACVHFEH
301: ALIAVQLDER VQEESPLDVV QDCWLVDRDN ADMTMARLER LLERRPELLN SVLLRQNPHD VQAWHERAKI FDKDPARQAA TYVQAVKTVD PTKATGKPHT
401: LWLALAKMYA NDGLVDSARL VFQRATRVNF KAVDHLATIY CQWAQMEVMQ QQPERAIDLI RQATSQPSVD ASSRAAAAVG NEPLQMKLHR SQKLWCMYLD
501: LMKTHASFES ICAVYDRMHD VGIITPLLVL NHASLLEEHK RFEDAFRVYE RGVNSFKSPH SDAIWEAYLT KFVHRNGNSR PERVRDMFAS ALLQAPPKKK
601: KALYLEYAKY EEVFGLVTRA MKIYEDAASA VPACDRLDVY EVYILRATQF CGLVKVRNIY SQAIHSDLLD KDARAMCIKF ADLEIGLGEV ARARALYAYV
701: SSFTDPKAHP GFWKRWNDFE VSHGDETTFR EMLRMKRTMT AAASAIEMDA IRAAPKRSLC PCARQQLDHE GIDEQRKRRC LA
001: MAISKDLYPS QEDLLYEEEL LRNQFSLKLW WRYLIAKAES PFKKRFIIYE RALKALPGSY KLWYAYLRER LDIVRNLPVT HPQYDSLNNT FERGLVTMHK
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
101: MPRIWVMYLQ TLTVQQLITR TRRTFDRALC ALPVTQHDRI WEPYLVFVSQ NGIPIETSLR VYRRYLMYDP SHIEEFIEFL VKSERWQESA ERLASVLNDD
201: KFYSIKGKTK HKLWLELCEL LVHHANVISG LNVDAIIRGG IRKFTDEVGM LWTSLADYYI RKNLLEKARD IYEEGMMKVV TVRDFSVIFD VYSRFEESTV
301: AKKMEMMSSS DEEDENEENG VEDDEEDVRL NFNLSVKELQ RKILNGFWLN DDNDVDLRLA RLEELMNRRP ALANSVLLRQ NPHNVEQWHR RVKIFEGNAA
401: KQILTYTEAV RTVDPMKAVG KPHTLWVAFA KLYENHKDLV NTRVIFDKAV QVNYKTVDHL ASVWCEWAEM ELRHKNFKGA LELMRRATAV PTVEVRRRVA
501: ADGNEPVQMK LHRSLRLWSF YVDLEESLGT LESTRAVYEK ILDLRIATPQ IIMNYAFLLE ENKYFEDAFK VYERGVKIFK YPHVKDIWVT YLTKFVKRYG
601: KTKLERAREL FEHAVSMAPS DAVRTLYLQY AKLEEDYGLA KRAMKVYEEA TKKVPEGQKL EMYEIYISRA AEIFGVPRTR EIYEQAIESG LPHKDVKIMC
701: IKFAELERSL GEIDRARALY KYSSQFADPR SDPEFWNKWH EFEVQHGNED TYREMLRIKR SVSASYSQTH FILPENMMQK DKLLDVEDAK GELKRAGLPE
801: DEMAALERQL LSTTTPTEPA KDGGRRVGFV SAGVISQSGE NEGKPVTGNG EDIELPDESD DESDGDDHVE ISQKEVPAAV FGGLARKRDE DGEEAGEDGA
901: AQKLGALERI KRQKLNQ
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.