Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047310_P001 | Maize | nucleus | 95.48 | 95.48 |
| EES15636 | Sorghum | nucleus | 87.57 | 86.59 |
| Os09t0104300-01 | Rice | nucleus | 80.23 | 81.14 |
| TraesCS7A01G456000.1 | Wheat | nucleus | 76.84 | 69.39 |
| TraesCS7D01G444900.1 | Wheat | nucleus | 76.27 | 68.88 |
| TraesCS7B01G357000.1 | Wheat | nucleus, plastid | 75.71 | 68.37 |
| TraesCS5A01G341200.1 | Wheat | nucleus | 71.19 | 63.96 |
| TraesCS5D01G346800.1 | Wheat | nucleus | 71.19 | 63.64 |
| TraesCS5B01G340800.1 | Wheat | nucleus | 70.06 | 62.94 |
| KRG91023 | Soybean | nucleus | 58.19 | 60.59 |
| GSMUA_Achr1P26130_001 | Banana | nucleus | 62.15 | 60.44 |
| GSMUA_Achr3P13080_001 | Banana | nucleus | 58.19 | 60.23 |
| KRH35739 | Soybean | nucleus | 56.5 | 58.82 |
| PGSC0003DMT400066221 | Potato | nucleus | 56.5 | 57.47 |
| Solyc01g107610.2.1 | Tomato | nucleus | 56.5 | 57.47 |
| VIT_03s0180g00180.t01 | Wine grape | nucleus | 57.63 | 57.3 |
| HORVU5Hr1G085580.2 | Barley | nucleus | 71.75 | 53.81 |
| CDX71211 | Canola | nucleus | 54.8 | 50.26 |
| Bra040613.1-P | Field mustard | nucleus | 55.37 | 50.26 |
| AT2G15270.1 | Thale cress | nucleus | 54.8 | 50.0 |
| CDY48221 | Canola | nucleus | 54.8 | 49.74 |
| HORVU7Hr1G105220.1 | Barley | nucleus | 75.14 | 44.48 |
Protein Annotations
| MapMan:35.2 | EntrezGene:8066271 | UniProt:C5WVP2 | ncoils:Coil | InterPro:DUF1168 | EnsemblPlants:EER92101 |
| ProteinID:EER92101 | ProteinID:EER92101.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003725 |
| GO:GO:0004860 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006464 | GO:GO:0006469 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019901 | GO:GO:0030234 | PFAM:PF06658 | PANTHER:PTHR13507 |
| EnsemblPlantsGene:SORBI_3001G331900 | UniParc:UPI0001A82001 | RefSeq:XP_002465103.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:+:62055422..62061098
Molecular Weight (calculated)
19850.0 Da
IEP (calculated)
10.050
GRAVY (calculated)
-1.486
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAPNSDSNM QQLVPIAPPG KASGADSGKE LVVADPGGKS SGGVKLREDE EDLEVKLRRI MENVPVRVSN TSGSSAGSGS GDFHQYRQMR RREQDRLARM
101: DADYQKRKEM AEFELRREER IKAAEERTAK KRLKRQKKKQ RKKEKRAKTG NNGGEDPNRV DSSDDDEGSD DDDKSKQ
101: DADYQKRKEM AEFELRREER IKAAEERTAK KRLKRQKKKQ RKKEKRAKTG NNGGEDPNRV DSSDDDEGSD DDDKSKQ
001: MSSGKPKQGD TRLVVAATTA SALMEAKKAD HGGSSSIVEY KPPVMLEDEE DLEVKLRRIL ENVPVRVSNT SGSSAGSGSG DFHQYRQMRR REQDRLTRMD
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.