Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g107610.2.1 | Tomato | nucleus | 98.28 | 98.28 |
| VIT_03s0180g00180.t01 | Wine grape | nucleus | 70.69 | 69.1 |
| KRG91023 | Soybean | nucleus | 64.37 | 65.88 |
| KRH35739 | Soybean | nucleus | 63.79 | 65.29 |
| GSMUA_Achr3P13080_001 | Banana | nucleus | 60.34 | 61.4 |
| GSMUA_Achr1P26130_001 | Banana | nucleus | 60.92 | 58.24 |
| Zm00001d047310_P001 | Maize | nucleus | 58.62 | 57.63 |
| Os09t0104300-01 | Rice | nucleus | 56.9 | 56.57 |
| EER92101 | Sorghum | nucleus | 57.47 | 56.5 |
| CDX71211 | Canola | nucleus | 59.77 | 53.89 |
| CDY48221 | Canola | nucleus | 60.34 | 53.85 |
| Bra040613.1-P | Field mustard | nucleus | 60.34 | 53.85 |
| EES15636 | Sorghum | nucleus | 54.6 | 53.07 |
| Zm00001d029576_P002 | Maize | mitochondrion, nucleus | 56.9 | 51.83 |
| AT2G15270.1 | Thale cress | nucleus | 56.9 | 51.03 |
| TraesCS7B01G357000.1 | Wheat | nucleus, plastid | 57.47 | 51.02 |
| TraesCS7D01G444900.1 | Wheat | nucleus | 56.9 | 50.51 |
| TraesCS7A01G456000.1 | Wheat | nucleus | 56.32 | 50.0 |
| TraesCS5B01G340800.1 | Wheat | nucleus | 53.45 | 47.21 |
| TraesCS5D01G346800.1 | Wheat | nucleus | 52.87 | 46.46 |
| TraesCS5A01G341200.1 | Wheat | nucleus | 51.72 | 45.69 |
| HORVU5Hr1G085580.2 | Barley | nucleus | 53.45 | 39.41 |
| HORVU7Hr1G105220.1 | Barley | nucleus | 58.62 | 34.11 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400066221 | EnsemblPlantsGene:PGSC0003DMG400025768 | EntrezGene:102603153 | InterPro:DUF1168 | ncoils:Coil | PANTHER:PTHR13507 |
| PFAM:PF06658 | PGSC:PGSC0003DMG400025768 | RefSeq:XP_006346363.1 | SEG:seg | UniParc:UPI000296EC99 | UniProt:M1CF79 |
| MapMan:35.2 | : | : | : | : | : |
Description
PRKR interacting protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400025768]
Coordinates
chr1:+:84036189..84039363
Molecular Weight (calculated)
19508.6 Da
IEP (calculated)
9.980
GRAVY (calculated)
-1.255
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSGRSTAV AAGDLQIVAA SERQVAALPP RPPASSSTAL VEYTPPAANP EEEDLEIKLR RILECVPVRV SNTSGSSAGS GSGDFHQYRQ MRRREQDRLA
101: RMDVDYQRRK EVAEFNLRRE EKVKAAEERT AKKRARRQKK KQRKKEKKSN SGAGGEETRR EESSDDDEAD SDHH
101: RMDVDYQRRK EVAEFNLRRE EKVKAAEERT AKKRARRQKK KQRKKEKKSN SGAGGEETRR EESSDDDEAD SDHH
001: MSSGKPKQGD TRLVVAATTA SALMEAKKAD HGGSSSIVEY KPPVMLEDEE DLEVKLRRIL ENVPVRVSNT SGSSAGSGSG DFHQYRQMRR REQDRLTRMD
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.