Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G340800.1 | Wheat | nucleus | 78.39 | 93.91 |
| TraesCS5D01G346800.1 | Wheat | nucleus | 77.54 | 92.42 |
| TraesCS5A01G341200.1 | Wheat | nucleus | 75.85 | 90.86 |
| EER92101 | Sorghum | nucleus | 53.81 | 71.75 |
| Zm00001d047310_P001 | Maize | nucleus | 53.39 | 71.19 |
| Os09t0104300-01 | Rice | nucleus | 51.69 | 69.71 |
| EES15636 | Sorghum | nucleus | 50.85 | 67.04 |
| Zm00001d029576_P002 | Maize | mitochondrion, nucleus | 52.12 | 64.4 |
| GSMUA_Achr3P13080_001 | Banana | nucleus | 44.07 | 60.82 |
| HORVU7Hr1G105220.1 | Barley | nucleus | 74.58 | 58.86 |
| GSMUA_Achr1P26130_001 | Banana | nucleus | 44.49 | 57.69 |
| KRH35739 | Soybean | nucleus | 41.53 | 57.65 |
| KRG91023 | Soybean | nucleus | 40.68 | 56.47 |
| VIT_03s0180g00180.t01 | Wine grape | nucleus | 41.53 | 55.06 |
| PGSC0003DMT400066221 | Potato | nucleus | 39.41 | 53.45 |
| Solyc01g107610.2.1 | Tomato | nucleus | 39.41 | 53.45 |
| AT2G15270.1 | Thale cress | nucleus | 41.53 | 50.52 |
| Bra040613.1-P | Field mustard | nucleus | 40.68 | 49.23 |
| CDX71211 | Canola | nucleus | 40.25 | 49.22 |
| CDY48221 | Canola | nucleus | 39.83 | 48.21 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G085580.2 | EnsemblPlantsGene:HORVU5Hr1G085580 | InterPro:DUF1168 | PANTHER:PTHR13507 | PFAM:PF06658 | SEG:seg |
| UniParc:UPI000B4824EB | UniProt:A0A287S3M2 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:575265233..575267525
Molecular Weight (calculated)
26418.9 Da
IEP (calculated)
5.983
GRAVY (calculated)
-1.080
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: ICYGIVNMSN INLEEFLSLA HASTFCSMQA DPQVELVSTM SDPVKDSNMQ QLVPMAPPAR VSGGELVARD SVGDSGKQLA LVEGGGKSSG GVKLREDEED
101: IEVKLRRIME NVPVRASNTS GSSAGSGSGD FHQYRQMRRR EQDRITRMET DYEKRKQVAE FNLRREERLK AAEDRTSKKR LKRQKKKQRK NEKRAKPSGG
201: GEEPNSEAVP KQVQEESDED DEGSDYEGDD KFKQCT
101: IEVKLRRIME NVPVRASNTS GSSAGSGSGD FHQYRQMRRR EQDRITRMET DYEKRKQVAE FNLRREERLK AAEDRTSKKR LKRQKKKQRK NEKRAKPSGG
201: GEEPNSEAVP KQVQEESDED DEGSDYEGDD KFKQCT
001: MSSGKPKQGD TRLVVAATTA SALMEAKKAD HGGSSSIVEY KPPVMLEDEE DLEVKLRRIL ENVPVRVSNT SGSSAGSGSG DFHQYRQMRR REQDRLTRMD
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.