Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040613.1-P | Field mustard | nucleus | 80.93 | 80.51 |
| CDX71211 | Canola | nucleus | 79.38 | 79.79 |
| CDY48221 | Canola | nucleus | 79.9 | 79.49 |
| KRG91023 | Soybean | nucleus | 53.09 | 60.59 |
| KRH35739 | Soybean | nucleus | 52.06 | 59.41 |
| VIT_03s0180g00180.t01 | Wine grape | nucleus | 54.12 | 58.99 |
| GSMUA_Achr3P13080_001 | Banana | nucleus | 50.52 | 57.31 |
| GSMUA_Achr1P26130_001 | Banana | nucleus | 53.61 | 57.14 |
| Solyc01g107610.2.1 | Tomato | nucleus | 51.03 | 56.9 |
| PGSC0003DMT400066221 | Potato | nucleus | 51.03 | 56.9 |
| EER92101 | Sorghum | nucleus | 50.0 | 54.8 |
| Zm00001d047310_P001 | Maize | nucleus | 49.48 | 54.24 |
| Os09t0104300-01 | Rice | nucleus | 48.45 | 53.71 |
| TraesCS7B01G357000.1 | Wheat | nucleus, plastid | 52.58 | 52.04 |
| TraesCS7A01G456000.1 | Wheat | nucleus | 51.55 | 51.02 |
| TraesCS7D01G444900.1 | Wheat | nucleus | 51.55 | 51.02 |
| EES15636 | Sorghum | nucleus | 46.91 | 50.84 |
| Zm00001d029576_P002 | Maize | mitochondrion, nucleus | 50.0 | 50.79 |
| TraesCS5B01G340800.1 | Wheat | nucleus | 50.0 | 49.24 |
| TraesCS5A01G341200.1 | Wheat | nucleus | 49.48 | 48.73 |
| TraesCS5D01G346800.1 | Wheat | nucleus | 48.97 | 47.98 |
| HORVU5Hr1G085580.2 | Barley | nucleus | 50.52 | 41.53 |
| HORVU7Hr1G105220.1 | Barley | nucleus | 51.55 | 33.44 |
Protein Annotations
| MapMan:35.2 | EntrezGene:816016 | UniProt:A0A178VPR2 | ProteinID:AAD26906.2 | ProteinID:AEC06380.1 | ProteinID:ANM61326.1 |
| ArrayExpress:AT2G15270 | EnsemblPlantsGene:AT2G15270 | RefSeq:AT2G15270 | TAIR:AT2G15270 | RefSeq:AT2G15270-TAIR-G | EnsemblPlants:AT2G15270.1 |
| TAIR:AT2G15270.1 | EMBL:AY045800 | EMBL:AY079332 | Unigene:At.14556 | ncoils:Coil | InterPro:DUF1168 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003725 | GO:GO:0004860 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0006464 | GO:GO:0006469 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019901 | GO:GO:0030234 | RefSeq:NP_001323551.1 | RefSeq:NP_565371.1 | ProteinID:OAP08359.1 | PFAM:PF06658 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13507 | UniProt:Q9SHU9 |
| UniParc:UPI000009E17A | SEG:seg | : | : | : | : |
Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU9]
Coordinates
chr2:+:6637831..6639429
Molecular Weight (calculated)
22341.5 Da
IEP (calculated)
10.043
GRAVY (calculated)
-1.265
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGKPKQGD TRLVVAATTA SALMEAKKAD HGGSSSIVEY KPPVMLEDEE DLEVKLRRIL ENVPVRVSNT SGSSAGSGSG DFHQYRQMRR REQDRLTRMD
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.