Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047310_P001 | Maize | nucleus | 84.82 | 91.53 |
| EES15636 | Sorghum | nucleus | 76.96 | 82.12 |
| Os09t0104300-01 | Rice | nucleus | 71.73 | 78.29 |
| TraesCS7D01G444900.1 | Wheat | nucleus | 68.59 | 66.84 |
| TraesCS7A01G456000.1 | Wheat | nucleus | 68.59 | 66.84 |
| TraesCS7B01G357000.1 | Wheat | nucleus, plastid | 68.06 | 66.33 |
| TraesCS5A01G341200.1 | Wheat | nucleus | 63.87 | 61.93 |
| TraesCS5D01G346800.1 | Wheat | nucleus | 63.87 | 61.62 |
| TraesCS5B01G340800.1 | Wheat | nucleus | 62.83 | 60.91 |
| KRG91023 | Soybean | nucleus | 53.93 | 60.59 |
| GSMUA_Achr1P26130_001 | Banana | nucleus | 57.59 | 60.44 |
| GSMUA_Achr3P13080_001 | Banana | nucleus | 53.93 | 60.23 |
| VIT_03s0180g00180.t01 | Wine grape | nucleus | 55.5 | 59.55 |
| KRH35739 | Soybean | nucleus | 52.88 | 59.41 |
| PGSC0003DMT400066221 | Potato | nucleus | 51.83 | 56.9 |
| Solyc01g107610.2.1 | Tomato | nucleus | 51.83 | 56.9 |
| HORVU5Hr1G085580.2 | Barley | nucleus | 64.4 | 52.12 |
| CDX71211 | Canola | nucleus | 50.79 | 50.26 |
| AT2G15270.1 | Thale cress | nucleus | 50.79 | 50.0 |
| CDY48221 | Canola | nucleus | 50.79 | 49.74 |
| Bra040613.1-P | Field mustard | nucleus | 50.79 | 49.74 |
| HORVU7Hr1G105220.1 | Barley | nucleus | 67.54 | 43.14 |
Protein Annotations
| EnsemblPlants:Zm00001d029576_P002 | EnsemblPlants:Zm00001d029576_T002 | EnsemblPlantsGene:Zm00001d029576 | EntrezGene:100283616 | InterPro:DUF1168 | ncoils:Coil |
| PANTHER:PTHR13507 | PFAM:PF06658 | ProteinID:ONL99031.1 | SEG:seg | UniParc:UPI0008430CAE | UniProt:A0A1D6K633 |
| MapMan:35.2 | : | : | : | : | : |
Description
PRKR interacting protein 1
Coordinates
chr1:+:77168841..77175012
Molecular Weight (calculated)
21557.3 Da
IEP (calculated)
10.383
GRAVY (calculated)
-1.405
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MCRQLGRQAG FHPAMSAPNS DSNMQQLVPI APPGKASGGD SEKGLVVVDL AGKRSGGVKL REDEEDLEVK LRRIMENVPV RVSNTSGSSA GSGSGDFHQY
101: RQMRRREQDR LARMDADYQK RKKMAEFELR REERMKAAEE RTAKKRLKRQ KKKQRKKEKR AKTGNNGGDE PNRVESSDDD HGSDDDDESK Q
101: RQMRRREQDR LARMDADYQK RKKMAEFELR REERMKAAEE RTAKKRLKRQ KKKQRKKEKR AKTGNNGGDE PNRVESSDDD HGSDDDDESK Q
001: MSSGKPKQGD TRLVVAATTA SALMEAKKAD HGGSSSIVEY KPPVMLEDEE DLEVKLRRIL ENVPVRVSNT SGSSAGSGSG DFHQYRQMRR REQDRLTRMD
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
101: IDYNKRLKMA EFTIRREEKQ KAAEEKTSKK RLKRQKKKQK KQEKKQKPNT TEEEVKQPRV GEISSDEGED EVEEESVLEP LRPMFNIKFQ ENRS
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.