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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029194_P001 Maize endoplasmic reticulum 63.84 86.1
Zm00001d029183_P001 Maize plasma membrane 63.42 85.85
TraesCS3D01G521200.1 Wheat cytosol 17.8 67.02
TraesCS3D01G521300.1 Wheat cytosol 17.8 67.02
KXG35545 Sorghum endoplasmic reticulum 46.33 62.36
Os02t0503850-00 Rice cytosol, extracellular, plastid 13.98 58.93
Os02t0503900-01 Rice endoplasmic reticulum, plastid 42.51 57.44
TraesCS3B01G582600.1 Wheat endoplasmic reticulum 41.1 57.06
Os02t0503700-00 Rice endoplasmic reticulum, golgi 44.21 55.2
TraesCS3A01G513900.2 Wheat endoplasmic reticulum, golgi 32.77 54.85
HORVU6Hr1G076250.4 Barley endoplasmic reticulum 15.54 54.73
Os02t0503800-00 Rice endoplasmic reticulum, extracellular 15.82 53.85
PGSC0003DMT400030215 Potato cytosol 18.22 50.39
TraesCS3D01G521100.1 Wheat endoplasmic reticulum, golgi 21.89 50.0
GSMUA_Achr6P30780_001 Banana endoplasmic reticulum, golgi 24.72 47.3
KXG25939 Sorghum endoplasmic reticulum 33.76 46.14
GSMUA_Achr6P30790_001 Banana endoplasmic reticulum 23.73 44.68
GSMUA_Achr5P01570_001 Banana endoplasmic reticulum 27.26 44.68
VIT_18s0001g09510.t01 Wine grape endoplasmic reticulum 30.79 43.69
VIT_18s0001g09500.t01 Wine grape endoplasmic reticulum 30.65 43.57
VIT_09s0002g06450.t01 Wine grape endoplasmic reticulum 31.07 43.39
PGSC0003DMT400030214 Potato endoplasmic reticulum 30.93 43.03
VIT_09s0002g06440.t01 Wine grape endoplasmic reticulum 30.79 42.91
EES01776 Sorghum endoplasmic reticulum 31.5 42.64
Solyc12g088460.1.1 Tomato endoplasmic reticulum 30.65 42.63
PGSC0003DMT400039835 Potato cytosol 22.18 42.43
PGSC0003DMT400039833 Potato golgi 30.37 41.99
EER93413 Sorghum endoplasmic reticulum 30.23 41.8
OQU79438 Sorghum cytosol 19.07 41.8
EER93412 Sorghum endoplasmic reticulum 30.51 41.7
Solyc12g088510.1.1 Tomato endoplasmic reticulum 29.94 41.65
PGSC0003DMT400055478 Potato endoplasmic reticulum 29.24 40.75
VIT_09s0002g06470.t01 Wine grape endoplasmic reticulum 29.38 40.62
EER98279 Sorghum endoplasmic reticulum, extracellular, plastid 30.51 40.6
Solyc04g078290.2.1 Tomato nucleus 29.1 40.23
VIT_18s0001g09520.t01 Wine grape golgi 29.66 40.08
OQU79439 Sorghum mitochondrion 18.93 39.53
OQU80433 Sorghum endoplasmic reticulum 29.94 39.41
KXG37498 Sorghum plastid 30.65 38.82
OQU90944 Sorghum golgi 23.02 38.26
VIT_09s0002g06480.t01 Wine grape endoplasmic reticulum 25.42 38.22
EES17271 Sorghum endoplasmic reticulum 27.54 37.21
PGSC0003DMT400055477 Potato endoplasmic reticulum 26.69 36.84
EES17276 Sorghum endoplasmic reticulum, plasma membrane 27.4 36.81
Solyc04g078270.2.1 Tomato endoplasmic reticulum 26.55 36.65
PGSC0003DMT400055474 Potato endoplasmic reticulum, golgi 16.67 29.8
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:C5WSP5InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfEnsemblPlants:EER92627ProteinID:EER92627ProteinID:EER92627.3GO:GO:0003674GO:GO:0003824
GO:GO:0004563GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0016787GO:GO:0020037
GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF161EnsemblPlantsGene:SORBI_3001G369600SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B8B9908
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:65824910..65828764
Molecular Weight (calculated)
78771.8 Da
IEP (calculated)
8.899
GRAVY (calculated)
-0.184
Length
708 amino acids
Sequence
(BLAST)
001: MPCPDADRLT TPPPRLLTLK VTCSFFPPED LCSKSQPKVS WSKSPLEVSW ISRLGGRRGL TVFMWCCSCL EGKWGPGSSA SSAIARSRGG RRRLTAFMWY
101: GSCLGRRRGP GSPASSATAH GWGGSRELTG CRIGGMRGLA SRRRDKGQNK LDTRAVINTH TEGTNHVVTN FFLAECWAMD VALSTTMAVA VVIALFIPAL
201: LLTLVQRRQH TGHNKPPPDP PEPRGIPLVG HLHLLIKKPL HRTLAHLADR QRHGDVLGLR FGSTTRVAVV SSASVAQQCL VALDTSFGNR PRLPSAKILS
301: YDWSTMGHSN CGAFWRQVRR TAATEISSVE RVQHFADVHE QEARAMARRL CRVALAASEG RALVDVKARL WEMLMNGLLD MLCKRTSSRS SDEQDDTVEV
401: SEEARCFMAM VEETMELTLT VWDFLPAPAR WLLDVNAVGR RLQRLQADRT EFLQRLIEEH KEMEKGGEVT RRTLVRVLLE LQKKDPEACT DQLIRSSCIS
501: AIEAGALSTS YTIEWVMSLL LNYPHVMKKA RDEIDACVGE PKRLLEATDL PKLPYLRCII LETLRLYPVV PLLIPRESST DCMVSGFHIP KGTMLVVNAF
601: AIHRDPGTWD DPETFLPERF EDGRNQAQAG KMVDLSFGMG RRRCPAENLG MQLAGIALGT MIQCFNWERV GTELVDMAEG SGLTMAKKVP LEAFCRPRAS
701: MLHLLSQI
Best Arabidopsis Sequence Match ( AT4G37320.1 )
(BLAST)
001: MDLTQILLLS FLFLTISIKL LLTKSNRKPN LPPSPAYPLP VIGHLHLLKQ PVHRTFHSIS KSLGNAPIFH LRLGNRLVYV ISSHSIAEEC FTKNDVVLAN
101: RPDIIMAKHV GYNFTNMIAA SYGDHWRNLR RIAAVEIFSS HRISTFSSIR KDEIRRLITH LSRDSLHGFV EVELKSLLTN LAFNNIIMMV AGKRYYGTGT
201: EDNDEAKLVR ELIAEIMAGA GSGNLADYLP SINWVTNFEN QTKILGNRLD RVLQKLVDEK RAEKEKGQTL IDHLLSFQET EPEYYTDVII KGIILALVLA
301: GTDTSSVTLE WAMSNLLNHP EILEKARAEI DDKIGSDRLV EESDIVNLHY LQNIVSETLR LYPAVPLLLP HFSSDECKVA GYDMPRRTLL LTNVWAMHRD
401: PGLWEEPERF KPERFEKEGE ARKLMPFGMG RRACPGAELG KRLVSLALGC LIQSFEWERV GAELVDMTEG EGITMPKATP LRAMCKARAI VGKTI
Arabidopsis Description
CYP81D5Cytochrome P450, family 81, subfamily D, polypeptide 5 [Source:UniProtKB/TrEMBL;Acc:O23156]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.