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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034104_P001 Maize plasma membrane 67.84 85.25
EER93412 Sorghum endoplasmic reticulum 63.15 51.93
TraesCS5A01G397700.1 Wheat endoplasmic reticulum, extracellular 63.38 51.82
TraesCS5B01G402700.1 Wheat endoplasmic reticulum 62.68 51.54
EER98279 Sorghum endoplasmic reticulum, extracellular, plastid 64.08 51.32
TraesCS5D01G407200.1 Wheat endoplasmic reticulum 61.74 50.77
EER93413 Sorghum endoplasmic reticulum 60.8 50.59
KXG37498 Sorghum plastid 65.02 49.55
OQU80433 Sorghum endoplasmic reticulum 57.98 45.91
EES01776 Sorghum endoplasmic reticulum 50.0 40.73
HORVU2Hr1G000670.1 Barley endoplasmic reticulum, mitochondrion, peroxisome 26.53 39.93
KXG35545 Sorghum endoplasmic reticulum 42.49 34.41
KXG25939 Sorghum endoplasmic reticulum 39.67 32.63
PGSC0003DMT400055474 Potato endoplasmic reticulum, golgi 29.34 31.57
VIT_18s0001g09500.t01 Wine grape endoplasmic reticulum 36.15 30.92
PGSC0003DMT400039833 Potato golgi 36.62 30.47
VIT_18s0001g09510.t01 Wine grape endoplasmic reticulum 35.68 30.46
PGSC0003DMT400030214 Potato endoplasmic reticulum 35.68 29.86
Solyc12g088460.1.1 Tomato endoplasmic reticulum 35.68 29.86
VIT_09s0002g06450.t01 Wine grape endoplasmic reticulum 35.45 29.78
VIT_09s0002g06440.t01 Wine grape endoplasmic reticulum 35.45 29.72
Solyc04g078290.2.1 Tomato nucleus 35.68 29.69
PGSC0003DMT400055478 Potato endoplasmic reticulum 35.21 29.53
Solyc12g088510.1.1 Tomato endoplasmic reticulum 34.98 29.27
VIT_18s0001g09520.t01 Wine grape golgi 35.92 29.2
VIT_09s0002g06470.t01 Wine grape endoplasmic reticulum 34.74 28.91
PGSC0003DMT400055477 Potato endoplasmic reticulum 34.27 28.46
Solyc04g078270.2.1 Tomato endoplasmic reticulum 34.27 28.46
EES17271 Sorghum endoplasmic reticulum 34.74 28.24
EES17276 Sorghum endoplasmic reticulum, plasma membrane 34.04 27.51
VIT_09s0002g06480.t01 Wine grape endoplasmic reticulum 29.34 26.54
PGSC0003DMT400030215 Potato cytosol 15.26 25.39
PGSC0003DMT400039835 Potato cytosol 21.83 25.14
OQU79438 Sorghum cytosol 18.54 24.46
OQU79439 Sorghum mitochondrion 19.25 24.19
EER92627 Sorghum cytosol 38.26 23.02
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1Z5S4V6InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114
InterPro:IPR036396EnsemblPlants:OQU90944ProteinID:OQU90944ProteinID:OQU90944.1PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463PANTHER:PTHR24298PANTHER:PTHR24298:SF194EnsemblPlantsGene:SORBI_3001G082500SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI000B8BA69BSEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:6373381..6375806
Molecular Weight (calculated)
47472.9 Da
IEP (calculated)
9.636
GRAVY (calculated)
-0.046
Length
426 amino acids
Sequence
(BLAST)
001: MQHSKHIKKF RRIEQKAHSL VVYSQDQESM EPAYVAILSF VFLFLLHRLF GRHRRRINGK NNRAQLPPSP PAIPVLGHLH LLGKKPIHAA LARLAERYGP
101: VFSLRLGSRE AVVVSSAACA TECFTENDVC FANRPRFPTL LLVSFGGATL PMCRYGPYWR SIRRVATVHL LSAHRVSCML PVISAEVRAM ARRMYRSAAG
201: GGAARVELKR RLFELSLSAL METIARTKMS RAVADDDTDM SPEAQEFMKA LDVLLRLLSA ANSWDYLPVL RWLDMFGVRN KILAAVSARD AFLRRLIDAE
301: RRRLEEGEGG ENDEKKSMIG VLLSLQKSEP EVYTDTTIMA LCSSMFAGGS ETTATTAEWA MSLLLSHPDV LKKAQAEIDA SVGHSRLLGA DDVPRLGYLQ
401: CIVTETLRLY PVVPTLVPHE STADCT
Best Arabidopsis Sequence Match ( AT2G23190.1 )
(BLAST)
001: MITPKLELLF FIIMFHVNSR FRYKLSYNFE LPCSVQHIYK FFDLMETHFL ILSLAFLFFI SLKLLFGKRH SKFNLPPSPA RPLPFIGHLH LLKQPLHRTF
101: LSFSQSLGDA PIFSLRLGNH LTVVVSSYSI AEECFTKNDI VLANRPKFIL GKHIEYNFTT MTSAPYGDHW RNLRRIGTLE IFSSHKLNGF LSVRKDEIRH
201: LLLRLSKNSQ HGFAKVEMRQ LFYDLTINNI LRMVAGKRFY GEGTEQDEVA RRVTQLIDEI VYRAGVGNAA DYIPILRWIT DFEKGVKELA SRVDEFLQSL
301: VDERRVHKQK GNTMMDHLLS LQETQPDYYT DVTLKGIIIV MILAGTETLA GTLEWAMLNL LNHPEVLEKA RTEIDTEVGF DRLMDEADTK NLPYLQWIVL
401: ETLRLYPVAP TNIPHMTSDD CILAGYDVPR GSMLLVNVWS MHRDPSIWEA PEMFKPERFK NEKLNQKLLS FGFGRRACPG VGLAHRLMSL ALGSMVQCFE
501: WQRIGEEYVD TREEPMAMMR PATPLLAMCK ARPIVHKFLD AFA
Arabidopsis Description
CYP81D7Cytochrome P450, family 81, subfamily D, polypeptide 7 [Source:UniProtKB/TrEMBL;Acc:O22188]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.