CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030215	Potato	cytosol	36.87	48.83
OQU79438	Sorghum	cytosol	43.07	45.2
Os12t0582700-01	Rice	endoplasmic reticulum, plasma membrane	66.67	42.4
TraesCS5D01G084100.1	Wheat	endoplasmic reticulum	63.42	40.95
TraesCS5B01G077700.1	Wheat	endoplasmic reticulum	63.42	40.95
TraesCS5A01G071700.1	Wheat	endoplasmic reticulum	62.54	40.46
HORVU5Hr1G018750.2	Barley	endoplasmic reticulum, golgi	61.95	39.77
TraesCS5D01G084200.1	Wheat	cytosol, endoplasmic reticulum, golgi	63.42	39.16
TraesCS5B01G077800.1	Wheat	golgi	61.95	37.97
PGSC0003DMT400039835	Potato	cytosol	40.71	37.3
CDY22433	Canola	cytosol	19.47	36.26
KXG25939	Sorghum	endoplasmic reticulum	47.49	31.08
VIT_18s0001g09510.t01	Wine grape	endoplasmic reticulum	42.77	29.06
VIT_09s0002g06480.t01	Wine grape	endoplasmic reticulum	39.82	28.66
EER93412	Sorghum	endoplasmic reticulum	42.77	27.99
EER93413	Sorghum	endoplasmic reticulum	42.18	27.93
Solyc12g088460.1.1	Tomato	endoplasmic reticulum	41.89	27.9
VIT_18s0001g09500.t01	Wine grape	endoplasmic reticulum	40.71	27.71
KXG35545	Sorghum	endoplasmic reticulum	42.77	27.57
Solyc04g078290.2.1	Tomato	nucleus	41.59	27.54
PGSC0003DMT400030214	Potato	endoplasmic reticulum	41.3	27.5
Solyc12g088510.1.1	Tomato	endoplasmic reticulum	41.3	27.5
VIT_09s0002g06450.t01	Wine grape	endoplasmic reticulum	41.0	27.42
PGSC0003DMT400055478	Potato	endoplasmic reticulum	41.0	27.36
VIT_09s0002g06440.t01	Wine grape	endoplasmic reticulum	40.71	27.17
VIT_09s0002g06470.t01	Wine grape	endoplasmic reticulum	41.0	27.15
PGSC0003DMT400039833	Potato	golgi	41.0	27.15
OQU80433	Sorghum	endoplasmic reticulum	42.18	26.58
EES01776	Sorghum	endoplasmic reticulum	41.0	26.58
EER98279	Sorghum	endoplasmic reticulum, extracellular, plastid	41.59	26.5
EES17276	Sorghum	endoplasmic reticulum, plasma membrane	41.0	26.38
PGSC0003DMT400055477	Potato	endoplasmic reticulum	38.94	25.73
KXG37498	Sorghum	plastid	41.89	25.4
EES17271	Sorghum	endoplasmic reticulum	39.23	25.38
VIT_18s0001g09520.t01	Wine grape	golgi	39.23	25.38
Solyc04g078270.2.1	Tomato	endoplasmic reticulum	38.35	25.34
OQU90944	Sorghum	golgi	24.19	19.25
EER92627	Sorghum	cytosol	39.53	18.93
PGSC0003DMT400055474	Potato	endoplasmic reticulum, golgi	16.52	14.14
CDY22432	Canola	cytosol, plastid	1.47	4.42

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	UniProt:A0A1Z5R783	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	EnsemblPlants:OQU79439	ProteinID:OQU79439	ProteinID:OQU79439.1	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF110	EnsemblPlantsGene:SORBI_3008G144600
SUPFAM:SSF48264	UniParc:UPI000B8B99F1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:57592417..57595865

Molecular Weight (calculated)

36966.4 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.313

Length

339 amino acids

Sequence
(BLAST)

001: MAMVAGTRMT GDQVRRFREM TEAGLAAAGA ANRHDSLPVL RLLDFGRTRR RLAGIAEARR QFGQSILDDY RRRRQRHPGG ADDDAGETAA RTVLGDLLRQ
101: QEEEEQSPEH LDDVVIRSVC LSLLQGGTDT TASTIEWATA LLLTNPSAAK KATAEIDAVV GTSRLLRESD LAGLPYLRCV VSETLRLYPL APNHVPHEAS
201: RDCVVAAAVV ARGTMVLVDV YSMQRDPAAW GERPDEFVPE RFMDDNGGGG RRDGSSGGSR WMMPFGMGRR KCPGESLALR MVGVALGVML QCFEWEPEGG
301: KKKEEVDMSE GSGLTMPMAT PLVAVCRPRA KMESLLKAL

Best Arabidopsis Sequence Match ( AT1G66540.1 )
(BLAST)

001: MVSAPYSEHW RNLRRIGAVE IFSNHRLNSF YTIRRDEIRR LIARLSRSPN ASLEFAKVEM NSMLSNLAFN NIIRMVTGKC YYGDGAEDDP EAKRVRQLIA
101: EAMSCFGAGH AADHLPMLRW ITDFERRVKK IAARLDEFFQ RLVDEKRVAK EKKENTMIDH LLSLQVSQPE YYTDHTIKGT MLSLILAGTD TSAVTLEWAL
201: SSLLNNPEVL KKVRDEIDNQ IGLDRLLEES DIPNLPYLQN IVSETLRLYP AGPLLVPHIS SEDCKVGGYD MPCGTMLLVN VWAIHRDPRL WDDPASFKPE
301: RFEKEGETHK LLTFGLGRRA CPGSGLARRL VSLSLGSLIQ CFEWERIGEE EVDMTEGGGL TMPRAIPLVA MCRARAFVGK IPHESG

Arabidopsis Description

At1g66540 [Source:UniProtKB/TrEMBL;Acc:A2RVN3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.