Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES17271 Sorghum endoplasmic reticulum 81.21 81.68
OQU79438 Sorghum cytosol 49.91 81.42
TraesCS6D01G110900.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 64.9 67.72
TraesCS6A01G121000.1 Wheat endoplasmic reticulum, plastid, vacuole 64.71 67.39
TraesCS6A01G120900.1 Wheat cytosol 37.0 67.01
TraesCS6B01G149300.1 Wheat endoplasmic reticulum 65.65 66.8
PGSC0003DMT400030215 Potato cytosol 24.29 50.0
PGSC0003DMT400030214 Potato endoplasmic reticulum 44.02 45.58
Solyc12g088460.1.1 Tomato endoplasmic reticulum 43.64 45.19
VIT_18s0001g09510.t01 Wine grape endoplasmic reticulum 42.69 45.09
VIT_18s0001g09500.t01 Wine grape endoplasmic reticulum 42.13 44.58
VIT_09s0002g06450.t01 Wine grape endoplasmic reticulum 42.88 44.58
VIT_09s0002g06440.t01 Wine grape endoplasmic reticulum 42.69 44.29
Solyc12g088510.1.1 Tomato endoplasmic reticulum 42.69 44.2
PGSC0003DMT400055478 Potato endoplasmic reticulum 42.5 44.09
Solyc04g078290.2.1 Tomato nucleus 42.69 43.95
PGSC0003DMT400039833 Potato golgi 42.5 43.75
EER98279 Sorghum endoplasmic reticulum, extracellular, plastid 43.45 43.05
VIT_18s0001g09520.t01 Wine grape golgi 42.31 42.56
PGSC0003DMT400039835 Potato cytosol 29.6 42.16
EER93412 Sorghum endoplasmic reticulum 41.37 42.08
KXG25939 Sorghum endoplasmic reticulum 40.8 41.51
VIT_09s0002g06470.t01 Wine grape endoplasmic reticulum 40.23 41.41
OQU80433 Sorghum endoplasmic reticulum 42.13 41.26
EER93413 Sorghum endoplasmic reticulum 40.04 41.21
OQU79439 Sorghum mitochondrion 26.38 41.0
VIT_09s0002g06480.t01 Wine grape endoplasmic reticulum 36.43 40.76
KXG35545 Sorghum endoplasmic reticulum 39.47 39.54
KXG37498 Sorghum plastid 41.94 39.53
EES01776 Sorghum endoplasmic reticulum 38.14 38.43
PGSC0003DMT400055477 Potato endoplasmic reticulum 36.43 37.43
Solyc04g078270.2.1 Tomato endoplasmic reticulum 36.24 37.23
OQU90944 Sorghum golgi 27.51 34.04
PGSC0003DMT400055474 Potato endoplasmic reticulum, golgi 22.39 29.8
EER92627 Sorghum cytosol 36.81 27.4
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8074280UniProt:C5YQH7InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES17276ProteinID:EES17276ProteinID:EES17276.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF153EnsemblPlantsGene:SORBI_3008G144300SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A88056RefSeq:XP_002443438.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr8:-:57570626..57572438
Molecular Weight (calculated)
56694.6 Da
IEP (calculated)
7.848
GRAVY (calculated)
0.052
Length
527 amino acids
Sequence
(BLAST)
001: MEASPSGDAL LFSIAIATTL LIVAAVWNRR VRGHDNNGAP SPPSRPLLGH LHLLGKPLHR SLAALAAAHG AGGGQLAPLL SLRLGARRAL LVSSHAAAEE
101: CFTAHDAALA GRPRLLAGER LGYGYTTVSW ASHGDHWRAV RRFLAVELFS ASRLAARAAD RRAEVAALVQ SLLLRDDAAA AGPDDASRAA AVTLRPRLFE
201: LVLNVMLRSL TGAPGHGDDV RRIQGIIEET FAVSGAPSFG DFYPSLRWID RLRGVDAALI RLQARRDALV AGLVRDKRQS RRAGGRHTEK NGAIDELLSL
301: QEIDPEYYTD TVIKGIVLIL LSAGTDTSAL TTEWAMAQLL THPEAMRKLT AELDTNVGTS RLVEESDMAN LPYLQCVVKE TLRLCPVGPV IPAHEAMEDC
401: TVGGFHVRRG TMILVNAWAI HRDPKLWEAP EEFRPERFMD AGMVTTVTAP LLPFGLGRRR CPGEGLAMRL VSLTLAALVQ CFDWDVGECG GAPDMAEGVG
501: LSMPMAKPLA AVCRPREFVS SMLSGST
Best Arabidopsis Sequence Match ( AT4G37320.1 )
(BLAST)
001: MDLTQILLLS FLFLTISIKL LLTKSNRKPN LPPSPAYPLP VIGHLHLLKQ PVHRTFHSIS KSLGNAPIFH LRLGNRLVYV ISSHSIAEEC FTKNDVVLAN
101: RPDIIMAKHV GYNFTNMIAA SYGDHWRNLR RIAAVEIFSS HRISTFSSIR KDEIRRLITH LSRDSLHGFV EVELKSLLTN LAFNNIIMMV AGKRYYGTGT
201: EDNDEAKLVR ELIAEIMAGA GSGNLADYLP SINWVTNFEN QTKILGNRLD RVLQKLVDEK RAEKEKGQTL IDHLLSFQET EPEYYTDVII KGIILALVLA
301: GTDTSSVTLE WAMSNLLNHP EILEKARAEI DDKIGSDRLV EESDIVNLHY LQNIVSETLR LYPAVPLLLP HFSSDECKVA GYDMPRRTLL LTNVWAMHRD
401: PGLWEEPERF KPERFEKEGE ARKLMPFGMG RRACPGAELG KRLVSLALGC LIQSFEWERV GAELVDMTEG EGITMPKATP LRAMCKARAI VGKTI
Arabidopsis Description
CYP81D5Cytochrome P450, family 81, subfamily D, polypeptide 5 [Source:UniProtKB/TrEMBL;Acc:O23156]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.