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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050323_P001 Maize endoplasmic reticulum, peroxisome, plastid 68.03 86.73
EER93413 Sorghum endoplasmic reticulum 68.77 72.27
EER93412 Sorghum endoplasmic reticulum 68.59 71.24
KXG37498 Sorghum plastid 73.98 71.2
TraesCS5A01G397900.1 Wheat endoplasmic reticulum 67.29 70.16
TraesCS5D01G407400.1 Wheat endoplasmic reticulum 67.29 69.88
TraesCS5B01G402900.1 Wheat endoplasmic reticulum 66.91 69.77
TraesCS5B01G403000.1 Wheat endoplasmic reticulum 66.91 69.77
TraesCS5A01G398000.1 Wheat endoplasmic reticulum 66.17 68.99
TraesCS5D01G407500.1 Wheat endoplasmic reticulum, peroxisome, plastid 67.29 67.04
HORVU5Hr1G096940.8 Barley golgi, peroxisome, plastid 67.84 66.97
HORVU5Hr1G096950.2 Barley golgi, peroxisome, plastid 66.17 66.54
TraesCS5B01G403100.1 Wheat golgi, peroxisome, plastid 66.73 66.48
Os03t0760200-01 Rice extracellular 62.08 65.11
OQU90944 Sorghum golgi 45.91 57.98
EER98279 Sorghum endoplasmic reticulum, extracellular, plastid 56.69 57.33
Os03t0760000-01 Rice endoplasmic reticulum, golgi 36.62 57.1
EES01776 Sorghum endoplasmic reticulum 53.53 55.07
PGSC0003DMT400030215 Potato cytosol 24.54 51.56
OQU79438 Sorghum cytosol 29.37 48.92
KXG25939 Sorghum endoplasmic reticulum 44.98 46.72
VIT_09s0002g06450.t01 Wine grape endoplasmic reticulum 42.19 44.77
KXG35545 Sorghum endoplasmic reticulum 43.68 44.68
VIT_09s0002g06440.t01 Wine grape endoplasmic reticulum 42.01 44.49
PGSC0003DMT400039835 Potato cytosol 30.48 44.32
PGSC0003DMT400055478 Potato endoplasmic reticulum 41.82 44.29
PGSC0003DMT400030214 Potato endoplasmic reticulum 41.64 44.01
VIT_18s0001g09500.t01 Wine grape endoplasmic reticulum 40.71 43.98
Solyc04g078290.2.1 Tomato nucleus 41.45 43.55
VIT_18s0001g09510.t01 Wine grape endoplasmic reticulum 40.15 43.29
Solyc12g088460.1.1 Tomato endoplasmic reticulum 40.89 43.22
PGSC0003DMT400039833 Potato golgi 40.89 42.97
EES17271 Sorghum endoplasmic reticulum 41.64 42.75
VIT_09s0002g06470.t01 Wine grape endoplasmic reticulum 40.52 42.58
Solyc12g088510.1.1 Tomato endoplasmic reticulum 40.15 42.44
OQU79439 Sorghum mitochondrion 26.58 42.18
EES17276 Sorghum endoplasmic reticulum, plasma membrane 41.26 42.13
VIT_09s0002g06480.t01 Wine grape endoplasmic reticulum 35.87 40.98
PGSC0003DMT400055477 Potato endoplasmic reticulum 39.03 40.94
Solyc04g078270.2.1 Tomato endoplasmic reticulum 38.85 40.74
VIT_18s0001g09520.t01 Wine grape golgi 39.03 40.08
PGSC0003DMT400055474 Potato endoplasmic reticulum, golgi 23.98 32.58
EER92627 Sorghum cytosol 39.41 29.94
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1Z5R9I5ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488
GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114InterPro:IPR036396EnsemblPlants:OQU80433ProteinID:OQU80433ProteinID:OQU80433.1
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF194
EnsemblPlantsGene:SORBI_3007G128000SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B8BB213SEG:seg:
Description
hypothetical protein
Coordinates
chr7:+:54360098..54361876
Molecular Weight (calculated)
58006.2 Da
IEP (calculated)
7.303
GRAVY (calculated)
0.018
Length
538 amino acids
Sequence
(BLAST)
001: MDDKACYMAA AGLSLAAFLL VLHRLVVVGR VGGGGGGGGK GNSNAAARRL PPSPPAVPFL GHLPLLVSGR AFHSSLAGLA ARHGPVFSLR LGSRAAVVVS
101: SPACAEACFT EHDVAFANRP RLPSQELASF GGAALAVSSY GPYWRTLRRV AAVRLLSTHR VASSMCPVIS AEVRAMLRRV MSRAAADGRV QLKDSLFELS
201: LSVLMETIAQ TKTSRTDADD GVSPEAHEFR RIVDEILPYL GATNPWDYLP SFLRRFDVLG VRSKIRDVVG RRDAFLQRLI DAERRRLQDD GGDGEGEKKS
301: MIAVMLSLQK SEPDVYTDTM IMALCGNLFT AGTETTSSTI EWAMSLLLNH PEALKKVEAE IEAAVGTSGG LITMDDVAGL SYLQCVISET LRLYPVAPLL
401: LPHESAADCA VGGYDVPRGT LLFVNAYAIH RDPAVWEEPG EFRPERFGRD GGKAAEAEAE GRLMLPFGMG RRRCPGETLA LRTVGLVLAT LIQCFHWDRV
501: DGAEIDMTES GGLTMPRAVP LEATCKPRQA MRHVLDQL
Best Arabidopsis Sequence Match ( AT4G37310.1 )
(BLAST)
001: MDCILLILTT LVAIFIVKIV LLVTKPNKNL PPSPNICFPI IGHLHLLKKP LLHRTLSHLS HSLGPVFSLR LGSRLAVIIS SPTAAEECFL TKNDIVLANR
101: PRFIMGKYVA YDYTSMVTAP YGDHWRNLRR ITALEVFSTN RLNASAEIRH DEVKMLLQKL HDLSVERPAK VELRQLLTGL TLNVIMRMMT GKRFFEEDDG
201: GKAGISLEFR ELVAEILELS AADNPADFLP ALRWFDYKGL VKRAKRIGER MDSLLQGFLD EHRANKDRLE FKNTMIAHLL DSQEKEPHNY SDQTIKGLIL
301: MMVVGGTDTS ALTVEWAMSN LLNHPQILET TRQNIDTQME TSSSRRLLKE EDLVNMNYLK NVVSETLRLY PVAPLMVPHV PSSDCVIGGF NVPRDTIVLV
401: NLWAIHRDPS VWDDPTSFKP ERFEGSDQFG HYNGKMMPFG LGRRACPGLS LANRVVGLLL GSMIQCFEWE SGSGGQVDMT EGPGLSLPKA EPLVVTCRTR
501: EMASELLFFG SEPSNKNV
Arabidopsis Description
CYP81H1Cytochrome P450, family 81, subfamily H, polypeptide 1 [Source:UniProtKB/TrEMBL;Acc:Q9SW67]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.