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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020340_P001 Maize golgi 82.13 83.24
TraesCS3D01G521300.1 Wheat cytosol 26.24 73.4
TraesCS3D01G521200.1 Wheat cytosol 26.05 72.87
HORVU6Hr1G076250.4 Barley endoplasmic reticulum 27.0 70.65
Os02t0503900-01 Rice endoplasmic reticulum, plastid 69.2 69.47
TraesCS3B01G582600.1 Wheat endoplasmic reticulum 67.3 69.41
Os02t0503850-00 Rice cytosol, extracellular, plastid 21.86 68.45
Os02t0503800-00 Rice endoplasmic reticulum, extracellular 26.81 67.79
Os02t0503700-00 Rice endoplasmic reticulum, golgi 72.43 67.2
TraesCS3A01G513900.2 Wheat endoplasmic reticulum, golgi 53.04 65.96
TraesCS3D01G521100.1 Wheat endoplasmic reticulum, golgi 38.59 65.48
PGSC0003DMT400030215 Potato cytosol 25.67 52.73
GSMUA_Achr5P01570_001 Banana endoplasmic reticulum 41.63 50.69
VIT_18s0001g09510.t01 Wine grape endoplasmic reticulum 47.53 50.1
GSMUA_Achr6P30780_001 Banana endoplasmic reticulum, golgi 35.17 50.0
KXG25939 Sorghum endoplasmic reticulum 48.67 49.42
VIT_18s0001g09500.t01 Wine grape endoplasmic reticulum 46.77 49.4
PGSC0003DMT400055478 Potato endoplasmic reticulum 46.58 48.23
GSMUA_Achr6P30790_001 Banana endoplasmic reticulum 34.41 48.14
PGSC0003DMT400030214 Potato endoplasmic reticulum 46.01 47.54
Solyc04g078290.2.1 Tomato nucleus 46.2 47.46
Solyc12g088460.1.1 Tomato endoplasmic reticulum 45.82 47.35
VIT_09s0002g06450.t01 Wine grape endoplasmic reticulum 45.44 47.14
PGSC0003DMT400039833 Potato golgi 45.63 46.88
VIT_09s0002g06440.t01 Wine grape endoplasmic reticulum 45.25 46.85
VIT_18s0001g09520.t01 Wine grape golgi 46.58 46.76
EER93412 Sorghum endoplasmic reticulum 45.63 46.33
EER92627 Sorghum cytosol 62.36 46.33
Solyc12g088510.1.1 Tomato endoplasmic reticulum 44.49 45.97
PGSC0003DMT400039835 Potato cytosol 32.32 45.95
EER93413 Sorghum endoplasmic reticulum 44.49 45.7
EER98279 Sorghum endoplasmic reticulum, extracellular, plastid 45.82 45.3
EES01776 Sorghum endoplasmic reticulum 44.87 45.12
OQU79438 Sorghum cytosol 27.38 44.58
VIT_09s0002g06470.t01 Wine grape endoplasmic reticulum 43.35 44.53
OQU80433 Sorghum endoplasmic reticulum 44.68 43.68
VIT_09s0002g06480.t01 Wine grape endoplasmic reticulum 38.97 43.52
KXG37498 Sorghum plastid 46.01 43.29
OQU79439 Sorghum mitochondrion 27.57 42.77
OQU90944 Sorghum golgi 34.41 42.49
PGSC0003DMT400055477 Potato endoplasmic reticulum 40.87 41.91
Solyc04g078270.2.1 Tomato endoplasmic reticulum 40.68 41.72
EES17271 Sorghum endoplasmic reticulum 40.11 40.27
EES17276 Sorghum endoplasmic reticulum, plasma membrane 39.54 39.47
PGSC0003DMT400055474 Potato endoplasmic reticulum, golgi 25.1 33.33
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1B6QCA4InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114InterPro:IPR036396EnsemblPlants:KXG35545ProteinID:KXG35545ProteinID:KXG35545.1PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF161EnsemblPlantsGene:SORBI_3002G189300
SUPFAM:SSF48264SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00081AE362SEG:seg:
Description
hypothetical protein
Coordinates
chr2:-:57541663..57546072
Molecular Weight (calculated)
59059.7 Da
IEP (calculated)
6.703
GRAVY (calculated)
-0.137
Length
526 amino acids
Sequence
(BLAST)
001: MDTLNTFAVI TLLLLPLLLA LAQDVRRRRH RNPPGPTALP VIGHLHLFRK PLHRTLARLA ARHGAVFQLR FGSRRVAVVS SAEAAEECLG ARDVTFANRP
101: RLPSGGILSY DWTTMGTASY GPYWRHVRRI AVTEILSVLR VQQFADVHER ETRAMARGLY RAAASTTRGG RARVELKSRL FELLMNAMMG MMCARRYYGG
201: DGKEDDEEET TAAGVSEEAR WFREMVEETM ELSGASTAWD FLPAWARWLD VGGVGRRLWR LREGRTKFLQ GLIEEQRKEM EKGAPARRTM IGVLLTLQNE
301: DPEACPDHLI RTLCISSLEA GTSTSVDTVE WAMSLLLNHP AALTRAQEEI DACIGQPAVR LLEATDLPKL HYLWCIIMET FRLYPPAPLL VPHESSADCT
401: VSGFHIPMGT MLLVNTFAIH RDPELWDRPA SFIPERFEGG NSEGKMFIPF GMGRRRCPAE NLGMQMVGLA LGTMIQCFNW ERVGEDLVDM TEGSGLTLPK
501: EVPLEAFYEP RASMVNLLSE IELEVL
Best Arabidopsis Sequence Match ( AT4G37370.1 )
(BLAST)
001: METKTLIFSI LFVVLSLIYL IGKLKRKPNL PPSPAWSLPV IGHLRLLKPP IHRTFLSLSQ SLNNAPIFSL RLGNRLVFVN SSHSIAEECF TKNDVVLANR
101: PNFILAKHVA YDYTTMIAAS YGDHWRNLRR IGSVEIFSNH RLNSFLSIRK DEIRRLVFRL SRNFSQEFVK VDMKSMLSDL TFNNILRMVA GKRYYGDGVE
201: DDPEAKRVRQ LIADVVACAG AGNAVDYLPV LRLVSDYETR VKKLAGRLDE FLQGLVDEKR EAKEKGNTMI DHLLTLQESQ PDYFTDRIIK GNMLALILAG
301: TDTSAVTLEW ALSNVLNHPD VLNKARDEID RKIGLDRLMD ESDISNLPYL QNIVSETLRL YPAAPMLLPH VASEDCKVAG YDMPRGTILL TNVWAIHRDP
401: QLWDDPMSFK PERFEKEGEA QKLMPFGLGR RACPGSGLAH RLINLTLGSL IQCLEWEKIG EEVDMSEGKG VTMPKAKPLE AMCRARPSVV KIFNESV
Arabidopsis Description
CYP81D8Cytochrome P450, family 81, subfamily D, polypeptide 8 [Source:UniProtKB/TrEMBL;Acc:Q9SZT7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.