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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G011790.4 Barley cytosol 44.02 75.0
TraesCS2A01G059400.1 Wheat endoplasmic reticulum 73.94 73.51
TraesCS2B01G069400.1 Wheat endoplasmic reticulum 73.55 72.99
TraesCS2D01G058900.1 Wheat endoplasmic reticulum, golgi 73.17 72.61
Os04t0255600-00 Rice cytosol 70.08 66.85
PGSC0003DMT400030215 Potato cytosol 24.13 48.83
KXG35545 Sorghum endoplasmic reticulum 49.42 48.67
EER93412 Sorghum endoplasmic reticulum 48.07 48.07
OQU79439 Sorghum mitochondrion 31.08 47.49
VIT_18s0001g09500.t01 Wine grape endoplasmic reticulum 45.37 47.19
PGSC0003DMT400055478 Potato endoplasmic reticulum 45.95 46.85
Solyc04g078290.2.1 Tomato nucleus 46.14 46.68
VIT_18s0001g09510.t01 Wine grape endoplasmic reticulum 44.59 46.29
EER93413 Sorghum endoplasmic reticulum 45.75 46.29
OQU79438 Sorghum cytosol 28.19 45.2
Solyc12g088460.1.1 Tomato endoplasmic reticulum 44.21 44.99
OQU80433 Sorghum endoplasmic reticulum 46.72 44.98
PGSC0003DMT400030214 Potato endoplasmic reticulum 44.02 44.79
VIT_18s0001g09520.t01 Wine grape golgi 44.98 44.47
PGSC0003DMT400039833 Potato golgi 43.44 43.95
VIT_09s0002g06450.t01 Wine grape endoplasmic reticulum 42.86 43.79
KXG37498 Sorghum plastid 47.1 43.65
EER98279 Sorghum endoplasmic reticulum, extracellular, plastid 44.79 43.61
Solyc12g088510.1.1 Tomato endoplasmic reticulum 42.66 43.42
VIT_09s0002g06440.t01 Wine grape endoplasmic reticulum 42.28 43.11
VIT_09s0002g06470.t01 Wine grape endoplasmic reticulum 42.28 42.77
EES01776 Sorghum endoplasmic reticulum 43.05 42.64
VIT_09s0002g06480.t01 Wine grape endoplasmic reticulum 38.61 42.46
PGSC0003DMT400039835 Potato cytosol 30.12 42.16
PGSC0003DMT400055477 Potato endoplasmic reticulum 40.54 40.94
EES17276 Sorghum endoplasmic reticulum, plasma membrane 41.51 40.8
Solyc04g078270.2.1 Tomato endoplasmic reticulum 40.15 40.55
EES17271 Sorghum endoplasmic reticulum 40.73 40.27
OQU90944 Sorghum golgi 32.63 39.67
HORVU2Hr1G011820.1 Barley endoplasmic reticulum 31.85 37.16
EER92627 Sorghum cytosol 46.14 33.76
PGSC0003DMT400055474 Potato endoplasmic reticulum, golgi 25.48 33.33
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1B6PJT5ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488
GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114InterPro:IPR036396EnsemblPlants:KXG25939ProteinID:KXG25939ProteinID:KXG25939.1
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF169
EnsemblPlantsGene:SORBI_3006G033800SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI00081AE8DESEG:seg:
Description
hypothetical protein
Coordinates
chr6:-:8949493..8953087
Molecular Weight (calculated)
56851.9 Da
IEP (calculated)
8.654
GRAVY (calculated)
-0.066
Length
518 amino acids
Sequence
(BLAST)
001: MVAATTLSFF FLSLATTLFL LLLHGLIKNK KRPCRLPPSP PSLPVIGHLH LLKKPLHRML SALAAQHGPV LLLRFGSRRV VHVADPAVAE ECFTTHDVTF
101: ANRPRLPSAR YLSNDYTTLG SSSYGPNWRN LRRIATVDVF SSHRILRSAD VRASEVRDMA RRLFQAAAAA AGADASRPVR CDVKARAFEL ALNTVARVIA
201: GKRYYGDGAA AASEEAERFR AMVREYFAMQ GASNVQDFVP VLALLDIGGV NKRAIRLSKA RNEWAQRLID EHRAAAAAGT ELGKTMVGDL LEMQASDPEA
301: YSDKVIRALC LSILQTGTDT TSATIEWGMA QLLNHPAAMA KAQAEIDEVV GTARILEEAD LPNLPYLMCI VTETLRLHPV APLLAPHESA SHCSVGGYDV
401: PAGTMLLVNV HAMHRDPRVW EEPERFSPER FEGGKSDGKW MLPFGMGRRR CPGEGLAVKM VGLALGTLVQ GFEWRRTTGD EEVDMTEASG LTMPKSVPLE
501: AFYWPRMEML SPLTALHS
Best Arabidopsis Sequence Match ( AT4G37320.1 )
(BLAST)
001: MDLTQILLLS FLFLTISIKL LLTKSNRKPN LPPSPAYPLP VIGHLHLLKQ PVHRTFHSIS KSLGNAPIFH LRLGNRLVYV ISSHSIAEEC FTKNDVVLAN
101: RPDIIMAKHV GYNFTNMIAA SYGDHWRNLR RIAAVEIFSS HRISTFSSIR KDEIRRLITH LSRDSLHGFV EVELKSLLTN LAFNNIIMMV AGKRYYGTGT
201: EDNDEAKLVR ELIAEIMAGA GSGNLADYLP SINWVTNFEN QTKILGNRLD RVLQKLVDEK RAEKEKGQTL IDHLLSFQET EPEYYTDVII KGIILALVLA
301: GTDTSSVTLE WAMSNLLNHP EILEKARAEI DDKIGSDRLV EESDIVNLHY LQNIVSETLR LYPAVPLLLP HFSSDECKVA GYDMPRRTLL LTNVWAMHRD
401: PGLWEEPERF KPERFEKEGE ARKLMPFGMG RRACPGAELG KRLVSLALGC LIQSFEWERV GAELVDMTEG EGITMPKATP LRAMCKARAI VGKTI
Arabidopsis Description
CYP81D5Cytochrome P450, family 81, subfamily D, polypeptide 5 [Source:UniProtKB/TrEMBL;Acc:O23156]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.