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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 8
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER93412 Sorghum endoplasmic reticulum 79.1 78.19
KXG37498 Sorghum plastid 84.38 77.28
TraesCS5A01G397900.1 Wheat endoplasmic reticulum 74.41 73.84
TraesCS5B01G403000.1 Wheat endoplasmic reticulum 74.02 73.45
TraesCS5B01G402900.1 Wheat endoplasmic reticulum 74.02 73.45
TraesCS5D01G407400.1 Wheat endoplasmic reticulum 74.02 73.17
TraesCS5A01G398000.1 Wheat endoplasmic reticulum 73.24 72.67
HORVU5Hr1G096950.2 Barley golgi, peroxisome, plastid 74.61 71.4
TraesCS5D01G407500.1 Wheat endoplasmic reticulum, peroxisome, plastid 74.41 70.56
HORVU5Hr1G096940.8 Barley golgi, peroxisome, plastid 74.22 69.72
TraesCS5B01G403100.1 Wheat golgi, peroxisome, plastid 73.44 69.63
OQU80433 Sorghum endoplasmic reticulum 72.27 68.77
Os03t0760200-01 Rice extracellular 68.55 68.42
Zm00001d013231_P001 Maize plasma membrane 53.52 67.82
EER98279 Sorghum endoplasmic reticulum, extracellular, plastid 63.67 61.28
OQU90944 Sorghum golgi 50.59 60.8
Os03t0760000-01 Rice endoplasmic reticulum, golgi 40.62 60.29
EES01776 Sorghum endoplasmic reticulum 57.23 56.02
PGSC0003DMT400030215 Potato cytosol 26.17 52.34
KXG25939 Sorghum endoplasmic reticulum 46.29 45.75
OQU79438 Sorghum cytosol 28.32 44.89
KXG35545 Sorghum endoplasmic reticulum 45.7 44.49
VIT_09s0002g06450.t01 Wine grape endoplasmic reticulum 43.95 44.38
PGSC0003DMT400039835 Potato cytosol 32.03 44.32
VIT_09s0002g06440.t01 Wine grape endoplasmic reticulum 43.95 44.29
PGSC0003DMT400055478 Potato endoplasmic reticulum 43.75 44.09
VIT_18s0001g09500.t01 Wine grape endoplasmic reticulum 42.38 43.57
VIT_18s0001g09510.t01 Wine grape endoplasmic reticulum 42.38 43.49
Solyc04g078290.2.1 Tomato nucleus 43.16 43.16
PGSC0003DMT400030214 Potato endoplasmic reticulum 42.77 43.03
Solyc12g088460.1.1 Tomato endoplasmic reticulum 42.38 42.63
VIT_09s0002g06470.t01 Wine grape endoplasmic reticulum 42.58 42.58
PGSC0003DMT400039833 Potato golgi 42.58 42.58
PGSC0003DMT400055477 Potato endoplasmic reticulum 42.58 42.5
Solyc04g078270.2.1 Tomato endoplasmic reticulum 42.38 42.3
OQU79439 Sorghum mitochondrion 27.93 42.18
Solyc12g088510.1.1 Tomato endoplasmic reticulum 41.8 42.04
EES17271 Sorghum endoplasmic reticulum 42.38 41.41
VIT_18s0001g09520.t01 Wine grape golgi 41.99 41.03
VIT_09s0002g06480.t01 Wine grape endoplasmic reticulum 37.7 40.98
EES17276 Sorghum endoplasmic reticulum, plasma membrane 41.21 40.04
PGSC0003DMT400055474 Potato endoplasmic reticulum, golgi 26.76 34.6
EER92627 Sorghum cytosol 41.8 30.23
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8086206UniProt:C5X059ncoils:CoilInterPro:Cyt_P450
InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER93413ProteinID:EER93413ProteinID:EER93413.1
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009605GO:GO:0009607
GO:GO:0009987GO:GO:0016020GO:GO:0016491GO:GO:0016705GO:GO:0016709GO:GO:0019748
GO:GO:0020037GO:GO:0042343GO:GO:0044550GO:GO:0046872GO:GO:0055114GO:GO:0098542
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF194EnsemblPlantsGene:SORBI_3001G082300SUPFAM:SSF48264unigene:Sbi.21314TMHMM:TMhelixUniParc:UPI0001A82D1C
RefSeq:XP_002466415.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:6356930..6358870
Molecular Weight (calculated)
56964.4 Da
IEP (calculated)
8.613
GRAVY (calculated)
-0.029
Length
512 amino acids
Sequence
(BLAST)
001: MDKAYVAILS VTFLFLLHYL MGHAAVGGKR KRLPPSPLAI PFIGHLHLVK TPFHSALVRL AARHGPVFSM RMGHRRAVVV SSPECAKACF TEYDQSFANR
101: PHFQSMRLVS FDGAMLSVSS YGPYWRNLRR VAAVQLLSAH RVACMSPVIA AEVRAMVRRM NRLAATSPGG AARVQLRRRL FELSLSVLME TIAQTKTSRS
201: EAYADTDISP EANELTQISQ EIMPYLGTAN LWDYLPFLRW FDVFGVRNKL MAAVRWRDAF LRRLIDAERR RLDDAGDSEK KSMLAVLLSL QKSEPELYTD
301: TMIMALCGDM FGAGTETTSS TTEWAMSLLL NHPEALNKAR AEIDAVVGSS RLITPDDVPR LGYLHCVINE TLRMYPAAPL LLPHESSADC NVGGYDVPRG
401: TLLIVNAYAI HRDPAVWEDP AEFRPERFED GKAEGRLLMP FGMGRRKCPG ETLALRTVGL VLGTLIQCFD WDRVDGVEID MTEAGGLTMP RAVPLEATCK
501: PRAAVSDVLK QL
Best Arabidopsis Sequence Match ( AT4G37320.1 )
(BLAST)
001: MDLTQILLLS FLFLTISIKL LLTKSNRKPN LPPSPAYPLP VIGHLHLLKQ PVHRTFHSIS KSLGNAPIFH LRLGNRLVYV ISSHSIAEEC FTKNDVVLAN
101: RPDIIMAKHV GYNFTNMIAA SYGDHWRNLR RIAAVEIFSS HRISTFSSIR KDEIRRLITH LSRDSLHGFV EVELKSLLTN LAFNNIIMMV AGKRYYGTGT
201: EDNDEAKLVR ELIAEIMAGA GSGNLADYLP SINWVTNFEN QTKILGNRLD RVLQKLVDEK RAEKEKGQTL IDHLLSFQET EPEYYTDVII KGIILALVLA
301: GTDTSSVTLE WAMSNLLNHP EILEKARAEI DDKIGSDRLV EESDIVNLHY LQNIVSETLR LYPAVPLLLP HFSSDECKVA GYDMPRRTLL LTNVWAMHRD
401: PGLWEEPERF KPERFEKEGE ARKLMPFGMG RRACPGAELG KRLVSLALGC LIQSFEWERV GAELVDMTEG EGITMPKATP LRAMCKARAI VGKTI
Arabidopsis Description
CYP81D5Cytochrome P450, family 81, subfamily D, polypeptide 5 [Source:UniProtKB/TrEMBL;Acc:O23156]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.