Factsheet for GSMUA_Achr10P01280_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P06410_001	Banana	cytosol	84.68	36.22
GSMUA_Achr8P25340_001	Banana	cytosol	80.18	30.32
Zm00001d036031_P001	Maize	cytosol	80.18	30.32
HORVU5Hr1G051850.3	Barley	cytosol	79.73	30.15
KXG19189	Sorghum	cytosol	79.73	30.15
TraesCS5A01G168400.5	Wheat	cytosol	79.73	30.15
TraesCS5B01G165200.3	Wheat	cytosol, golgi	79.73	30.15
TraesCS5D01G172700.4	Wheat	cytosol	79.73	30.15
GSMUA_Achr4P09250_001	Banana	cytosol	79.28	29.98
GSMUA_Achr4P13030_001	Banana	cytosol	78.83	29.81
Zm00001d045482_P001	Maize	cytosol	78.83	29.81
KXG20320	Sorghum	cytosol	77.93	29.47
Zm00001d046506_P002	Maize	cytosol	77.03	28.74
GSMUA_AchrUn_...	Banana	cytosol	9.01	8.26
GSMUA_AchrUn_...	Banana	cytosol	0.9	0.77

Protein Annotations

EnsemblPlants:GSMUA_Achr10P01280_001	EnsemblPlants:GSMUA_Achr10T01280_001	EnsemblPlantsGene:GSMUA_Achr10G01280_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	PANTHER:PTHR10648
PANTHER:PTHR10648:SF20	PFAM:PF13646	PFscan:PS50077	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0002950B00
UniProt:M0REF5	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	:	:	:

Description

Putative Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:GMGC_GENE;Acc:GSMUA_Achr10G01280_001]

Coordinates

chr10:+:2866326..2872274

Molecular Weight (calculated)

24813.5 Da

IEP (calculated)

5.588

GRAVY (calculated)

0.258

Length

222 amino acids

Sequence
(BLAST)

001: MEYCLKPNTS DGVVIVKLHV VQVIGIGLLS QSLLPAIVEL AEDRHWRVRL AIIEYIPLLA SQLGVGFFDD KLGALCMQWL EDKVFSIREA ATNNLKRLAE
101: EFGPEWAMQH IVPQLLEKIS NPHYLHRMTI LQAISLLSPV LGSDITCQKL LPVIISASKD RVPNIKFNVA KVLQSLVPIF DHSVVEQTVR PCLVELGEDP
201: DVDVRYFASQ ALQTCDSAMM SN

Best Arabidopsis Sequence Match ( AT1G13320.4 )
(BLAST)

001: MPMVRRAAAT NLGKFAATIE SAHLKTDIMS MFEDLTQDDQ DSVRLLAVEG CAALGKLLEP QDCVAHILPV IVNFSQDKSW RVRYMVANQL YELCEAVGPE
101: PTRTDLVPAY ARLLCDNEAE VRIAAAGKVT KFCRILNPEL AIQHILPCVK ELSSDSSQHV RSALASVIMG MAPVLGKDAT IEHLLPIFLS LLKDEFPDVR
201: LNIISKLDQV NQVIGIDLLS QSLLPAIVEL AEDRHWRVRL AIIEYIPLLA SQLGVGFFDE KLGALCMQWL QDKVHSIREA AANNLKRLAE EFGPEWAMQH
301: IVPQVLEMIN NPHYLYRMTI LRAVSLLAPV MGSEITCSKL LPAVITASKD RVPNIKFNVA KMMQSLIPIV DQAVVENMIR PCLVELSEDP DVDVRYFANQ
401: ALQSIDNVMM SS

Arabidopsis Description

PP2AA3Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38951]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.