Factsheet for Zm00001d036031_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d012700_P001
Zm00001d025308_P001
Zm00001d043399_P001
Zm00001d044621_P001
Zm00001d045632_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13320.1	Zm00001d012700_P001	AT1G29195.1	21798944
AT1G13320.1	Zm00001d043399_P001	AT1G29195.1	21798944
AT1G13320.1	Zm00001d025308_P001	AT3G08780.1	21798944
AT1G13320.1	Zm00001d044621_P001	AT3G08780.1	21798944
AT1G13320.1	Zm00001d045632_P004	AT3G54850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19189	Sorghum	cytosol	99.15	99.15
Zm00001d045482_P001	Maize	cytosol	98.81	98.81
HORVU5Hr1G051850.3	Barley	cytosol	97.44	97.44
TraesCS5D01G172700.4	Wheat	cytosol	97.27	97.27
TraesCS5B01G165200.3	Wheat	cytosol, golgi	97.27	97.27
TraesCS5A01G168400.5	Wheat	cytosol	97.27	97.27
Zm00001d046506_P002	Maize	cytosol	93.53	92.27
Solyc05g009600.2.1	Tomato	plastid	89.61	89.61
AT3G25800.3	Thale cress	cytosol	89.44	89.44
KRH35974	Soybean	endoplasmic reticulum, nucleus	88.93	89.23
KRG90789	Soybean	endoplasmic reticulum, nucleus	88.93	89.23
AT1G13320.1	Thale cress	cytosol	87.05	87.05
KRH70562	Soybean	endoplasmic reticulum	86.71	86.71
KRH32720	Soybean	cytosol	15.5	85.05
Bra017348.1-P	Field mustard	cytosol	36.63	83.01
Solyc04g007100.2.1	Tomato	cytosol	73.42	82.1
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum	30.32	80.18
VIT_15s0045g00050.t01	Wine grape	cytosol	24.36	79.44
VIT_03s0038g00200.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	19.25	79.02
VIT_19s0027g00070.t01	Wine grape	cytosol	10.05	76.62
VIT_00s0131g00290.t01	Wine grape	cytosol	10.05	76.62
VIT_00s0131g00270.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	9.88	75.32
GSMUA_AchrUn_...	Banana	cytosol	33.22	74.71
VIT_04s0043g00200.t01	Wine grape	mitochondrion	9.54	72.73
Solyc05g045950.1.1	Tomato	cytosol	18.23	60.11
VIT_04s0008g07090.t01	Wine grape	cytosol	8.52	55.56
CDX84993	Canola	plasma membrane	38.67	53.79
PGSC0003DMT400044033	Potato	mitochondrion	6.47	52.78
Bra025162.1-P	Field mustard	cytosol	57.75	44.03

Protein Annotations

Gene3D:1.25.10.10	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	EntrezGene:732740	UniProt:A0A1D6LKF6	ProteinID:AQK80180.1
ProteinID:AQK80186.1	ProteinID:AQK80187.1	ProteinID:AQK80192.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:HEAT	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133
PFAM:PF02985	PFAM:PF13646	PFscan:PS50077	PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	SUPFAM:SSF48371
UniParc:UPI000221851A	EnsemblPlantsGene:Zm00001d036031	EnsemblPlants:Zm00001d036031_P001	EnsemblPlants:Zm00001d036031_T001	:	:

Description

protein phosphatase homolog17Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform

Coordinates

chr6:+:67349219..67355951

Molecular Weight (calculated)

65631.0 Da

IEP (calculated)

4.691

GRAVY (calculated)

0.101

Length

587 amino acids

Sequence
(BLAST)

001: MAMIDEPLYP IAVLIDELKN EDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDE DEVLLAMAEE LGVFIPYVGG VEHAHVLLPP LETLCTVEET
101: CVRDKAVESL CRIGAQMKET DIVDWFIPVV KRLAAGEWFT ARVSSCGLFH IAYPSASDQL KTELRTIYGQ LCQDDMPMVR RAAASNLGKF AATVEQNHLK
201: TEIMSIFDDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVA HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRAD LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPQLSVQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEQLV PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLEDKVF SIRDAAANNL KRLAEEFGPE WAMQHIIPQV LEKINNPHYL YRMTILQAIS
501: LLAPVMGAEI TCQKLLPVVI NSSKDRVPNI KFNVAKVLQS LVPILDQSVV EKTVKPCLVE LSEDPDVDVR YYANQALQAC DQMMVSS

Best Arabidopsis Sequence Match ( AT3G25800.3 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.