Factsheet for Bra017348.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007105.1-P
Bra010845.1-P
Bra029720.1-P
Bra030125.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13320.1	Bra010845.1-P	AT1G29195.1	21798944
AT1G13320.1	Bra030125.1-P	AT1G29195.1	21798944
AT1G13320.1	Bra029720.1-P	AT3G08780.1	21798944
AT1G13320.1	Bra007105.1-P	AT3G54850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04182	Canola	cytosol	47.49	94.62
Solyc05g009600.2.1	Tomato	plastid	86.87	38.33
PGSC0003DMT400033762	Potato	cytosol	86.87	38.33
Solyc04g007100.2.1	Tomato	cytosol	76.83	37.9
AT1G13320.1	Thale cress	cytosol	85.71	37.82
CDY04181	Canola	endoplasmic reticulum	50.58	37.75
KXG19189	Sorghum	cytosol	83.78	36.97
Zm00001d045482_P001	Maize	cytosol	83.01	36.63
Zm00001d036031_P001	Maize	cytosol	83.01	36.63
HORVU5Hr1G051850.3	Barley	cytosol	82.24	36.29
TraesCS5D01G172700.4	Wheat	cytosol	81.85	36.12
TraesCS5B01G165200.3	Wheat	cytosol, golgi	81.85	36.12
TraesCS5A01G168400.5	Wheat	cytosol	81.85	36.12
KXG20320	Sorghum	cytosol	81.08	35.78
Bra012474.1-P	Field mustard	cytosol	80.31	35.49
Bra039992.1-P	Field mustard	cytosol	18.15	35.34
Bra010996.1-P	Field mustard	cytosol	79.92	35.2
Zm00001d046506_P002	Maize	cytosol	79.54	34.62
PGSC0003DMT400041034	Potato	cytosol	35.14	34.21
Bra024741.1-P	Field mustard	cytosol	41.31	32.52
Solyc05g045950.1.1	Tomato	cytosol	20.46	29.78
Bra035030.1-P	Field mustard	cytosol	17.76	29.49
PGSC0003DMT400041039	Potato	cytosol	33.59	27.36
Bra025162.1-P	Field mustard	cytosol	52.12	17.53

Protein Annotations

Gene3D:1.25.10.10	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra017348
EnsemblPlants:Bra017348.1	EnsemblPlants:Bra017348.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886
GO:GO:0016020	GO:GO:0030312	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	UniProt:M4DLG7
PFscan:PS50077	PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	SUPFAM:SSF48371	UniParc:UPI00025421D3	:

Description

AT3G25800 (E=1e-055) PDF1, PR 65, PP2AA2 | PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2); protein phosphatase type 2A regulator

Coordinates

chrA09:+:14430293..14433566

Molecular Weight (calculated)

28990.9 Da

IEP (calculated)

4.246

GRAVY (calculated)

-0.027

Length

259 amino acids

Sequence
(BLAST)

001: MPTIEEPIYY PIVVLIDELK NDDIQLRLNS IRRLSTIARA LGEERTRKEL IPFLSENNED DDEVLLAMAE ELGVFIPYAG GVEHANDLLP PLETLSTVEE
101: KAVESLCRVG AQMRESELVD HFLPLVKELS SDSSQHIKSA LASVIMGMAP VLGKDATIEH LLPIFLSLLK DEFPDVCLNI ISKLDQVNQV HSIRDAAANN
201: LKRLAEEFGH EWAMQHIVPQ VVENMIRPGL VELSEDPDVD VRFFANQALQ SIDNVMMSS

Best Arabidopsis Sequence Match ( AT3G25800.2 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRQFQT SNSTSLKYFN PSFQ

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.