Factsheet for Zm00001d046506_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d012700_P001
Zm00001d025308_P001
Zm00001d043399_P001
Zm00001d044621_P001
Zm00001d045632_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13320.1	Zm00001d012700_P001	AT1G29195.1	21798944
AT1G13320.1	Zm00001d043399_P001	AT1G29195.1	21798944
AT1G13320.1	Zm00001d025308_P001	AT3G08780.1	21798944
AT1G13320.1	Zm00001d044621_P001	AT3G08780.1	21798944
AT1G13320.1	Zm00001d045632_P004	AT3G54850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20320	Sorghum	cytosol	96.3	97.61
Zm00001d036031_P001	Maize	cytosol	92.27	93.53
Zm00001d045482_P001	Maize	cytosol	92.1	93.36
TraesCS5D01G172700.4	Wheat	cytosol	91.76	93.02
TraesCS5B01G165200.3	Wheat	cytosol, golgi	91.76	93.02
TraesCS5A01G168400.5	Wheat	cytosol	91.76	93.02
HORVU5Hr1G051850.3	Barley	cytosol	91.76	93.02
Solyc05g009600.2.1	Tomato	plastid	85.21	86.37
AT3G25800.3	Thale cress	cytosol	85.04	86.2
KRG90789	Soybean	endoplasmic reticulum, nucleus	84.54	85.98
KRH35974	Soybean	endoplasmic reticulum, nucleus	84.2	85.64
AT1G13320.1	Thale cress	cytosol	83.03	84.16
KRH70562	Soybean	endoplasmic reticulum	82.69	83.82
KRH32720	Soybean	cytosol	14.45	80.37
Bra017348.1-P	Field mustard	cytosol	34.62	79.54
Solyc04g007100.2.1	Tomato	cytosol	69.41	78.67
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum	28.74	77.03
VIT_03s0038g00200.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	18.32	76.22
VIT_15s0045g00050.t01	Wine grape	cytosol	23.03	76.11
VIT_19s0027g00070.t01	Wine grape	cytosol	9.58	74.03
VIT_00s0131g00290.t01	Wine grape	cytosol	9.58	74.03
VIT_00s0131g00270.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	9.41	72.73
GSMUA_AchrUn_...	Banana	cytosol	31.76	72.41
VIT_04s0043g00200.t01	Wine grape	mitochondrion	9.08	70.13
Solyc05g045950.1.1	Tomato	cytosol	16.81	56.18
VIT_04s0008g07090.t01	Wine grape	cytosol	8.4	55.56
CDX84993	Canola	plasma membrane	36.81	51.9
PGSC0003DMT400044033	Potato	mitochondrion	6.05	50.0
Bra025162.1-P	Field mustard	cytosol	55.13	42.6

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100283785	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	UniProt:A0A1D6P323	ProteinID:AQL04407.1
InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0005488	InterPro:HEAT_type_2	InterPro:IPR011989
InterPro:IPR021133	PFAM:PF12755	PFAM:PF13646	PFscan:PS50077	PANTHER:PTHR10648	PANTHER:PTHR10648:SF20
SUPFAM:SSF48371	UniParc:UPI0008445FA6	InterPro:Vac14_Fab1-bd	EnsemblPlantsGene:Zm00001d046506	EnsemblPlants:Zm00001d046506_P002	EnsemblPlants:Zm00001d046506_T002

Description

Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform

Coordinates

chr9:+:92956668..92968289

Molecular Weight (calculated)

66371.8 Da

IEP (calculated)

4.697

GRAVY (calculated)

0.095

Length

595 amino acids

Sequence
(BLAST)

001: MAMIDEPLYP IAVLIDELKN EDIQLRLNSI KKLSTIARAL GEERTRKELI PFLSENNDDE DEVLLAMAEE LGVFIPYVGG VEHAHVLLPP LETLCTVEET
101: CVRDKAVESL CQIGAQMKEN DIVDWFAHVV KRLAVGEWFT ARVSSCGLFH IAYPSAPEQL KAELRTIYGQ LCQDDMPMVR RAAASNLGKF AATVEQSHLK
201: TEIMSMFDDL TQDDQDSVRL LAVEGCAALG KLLEPQDCAA HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGTEPTRGD LVSAYVRLLC DNEAEVRIAA
301: AGKVTKFCKI LNPQIAIEHI LPCIKELSSD SSQHVRSALA SVIMGMAPVL GKDATLEQLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELSEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLEDKVF SIRDAGANNL KRLTEEFGPE WAMQHIIPQV SFSTVKNVLE KINNPHYLYR
501: MTTLQAISLL APVMGPDITC QQLLPVVIAS SKDRVPNMKF NVAKVLQSLV PILDQSVVEK TVKPCLVELS EDPDVDVRYY AHQALRACDQ MVISS

Best Arabidopsis Sequence Match ( AT1G13320.1 )
(BLAST)

001: MSMVDEPLYP IAVLIDELKN DDIQRRLNSI KRLSIIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGGFILYVGG VEYAYVLLPP LETLSTVEET
101: CVREKAVDSL CRIGAQMRES DLVEHFTPLA KRLSAGEWFT ARVSACGIFH IAYPSAPDVL KTELRSIYGQ LCQDDMPMVR RAAATNLGKF AATIESAHLK
201: TDIMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVA HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTD LVPAYARLLC DNEAEVRIAA
301: AGKVTKFCRI LNPELAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDEKLGAL CMQWLQDKVH SIREAAANNL KRLAEEFGPE WAMQHIVPQV LEMINNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPAVI TASKDRVPNI KFNVAKMMQS LIPIVDQAVV ENMIRPCLVE LSEDPDVDVR YFANQALQSI DNVMMSS

Arabidopsis Description

PP2AA3Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38951]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.