Factsheet for VIT_15s0045g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0027g00070.t01	Wine grape	cytosol	38.89	90.91
VIT_00s0131g00290.t01	Wine grape	cytosol	38.89	90.91
VIT_00s0131g00270.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.78	88.31
VIT_04s0043g00200.t01	Wine grape	mitochondrion	37.22	87.01
VIT_03s0038g00200.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	67.22	84.62
VIT_00s2496g00010.t01	Wine grape	cytosol	36.67	77.65
VIT_00s2436g00010.t01	Wine grape	cytosol	34.44	77.5
VIT_01s0011g00330.t01	Wine grape	cytosol	36.11	76.47
VIT_04s0008g07090.t01	Wine grape	cytosol	28.33	56.67
GSMUA_Achr3P06410_001	Banana	cytosol	81.67	28.32
TraesCS5D01G172700.4	Wheat	cytosol	80.56	24.7
TraesCS5B01G165200.3	Wheat	cytosol, golgi	80.56	24.7
TraesCS5A01G168400.5	Wheat	cytosol	80.56	24.7
HORVU5Hr1G051850.3	Barley	cytosol	80.56	24.7
Zm00001d045482_P001	Maize	cytosol	80.56	24.7
KXG19189	Sorghum	cytosol	80.0	24.53
Zm00001d036031_P001	Maize	cytosol	79.44	24.36
VIT_17s0000g03870.t01	Wine grape	cytosol	85.0	23.83
KXG20320	Sorghum	cytosol	77.22	23.68
Zm00001d046506_P002	Maize	cytosol	76.11	23.03
VIT_01s0011g03280.t01	Wine grape	cytosol	72.22	22.15
CDX84993	Canola	plasma membrane	51.67	22.04

Protein Annotations

Gene3D:1.25.10.10	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:CCB60733
ProteinID:CCB60733.1	UniProt:F6I1B7	EMBL:FN596510	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:HEAT	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	PFAM:PF02985	PFscan:PS50077
PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	SUPFAM:SSF48371	UniParc:UPI000210AA90	ArrayExpress:VIT_15s0045g00050	EnsemblPlantsGene:VIT_15s0045g00050
EnsemblPlants:VIT_15s0045g00050.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr15:+:4585988..4586568

Molecular Weight (calculated)

20430.1 Da

IEP (calculated)

8.225

GRAVY (calculated)

0.106

Length

180 amino acids

Sequence
(BLAST)

001: MPMVKRSAAS NLGKFAATVE AAHSKADIMS IFEDLTQDDQ DSVRLLAVKG CAALGKLLEP QDCVAHILPI IVNFSQDKSW RVRYMVANQL YELCEAVGPE
101: PTRSDLVPAY VQLLRDNEAE VRIAAAGKVT KFCRILNPKL AIQHILPCVK KMSFHRNYHQ ILPSMFVLLW LQLLWEWHLF

Best Arabidopsis Sequence Match ( AT3G25800.3 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.