Factsheet for HORVU5Hr1G051850.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G082810.2
HORVU3Hr1G073050.1
HORVU7Hr1G000780.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13320.1	HORVU3Hr1G073050.1	AT1G29195.1	21798944
AT1G13320.1	HORVU2Hr1G082810.2	AT3G08780.1	21798944
AT1G13320.1	HORVU7Hr1G000780.1	AT3G54850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G172700.4	Wheat	cytosol	99.83	99.83
TraesCS5B01G165200.3	Wheat	cytosol, golgi	99.83	99.83
TraesCS5A01G168400.5	Wheat	cytosol	99.83	99.83
Zm00001d036031_P001	Maize	cytosol	97.44	97.44
KXG19189	Sorghum	cytosol	97.44	97.44
Zm00001d045482_P001	Maize	cytosol	97.1	97.1
KXG20320	Sorghum	cytosol	94.21	94.21
Zm00001d046506_P002	Maize	cytosol	93.02	91.76
Solyc05g009600.2.1	Tomato	plastid	89.95	89.95
KRG90789	Soybean	endoplasmic reticulum, nucleus	89.44	89.74
AT3G25800.3	Thale cress	cytosol	89.61	89.61
KRH35974	Soybean	endoplasmic reticulum, nucleus	89.1	89.4
AT1G13320.1	Thale cress	cytosol	87.9	87.9
KRH70562	Soybean	endoplasmic reticulum	87.05	87.05
KRH32720	Soybean	cytosol	15.67	85.98
Bra017348.1-P	Field mustard	cytosol	36.29	82.24
Solyc04g007100.2.1	Tomato	cytosol	73.42	82.1
VIT_15s0045g00050.t01	Wine grape	cytosol	24.7	80.56
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum	30.15	79.73
VIT_03s0038g00200.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	19.42	79.72
VIT_00s0131g00290.t01	Wine grape	cytosol	10.05	76.62
VIT_19s0027g00070.t01	Wine grape	cytosol	10.05	76.62
VIT_00s0131g00270.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	9.88	75.32
GSMUA_AchrUn_...	Banana	cytosol	32.71	73.56
VIT_04s0043g00200.t01	Wine grape	mitochondrion	9.54	72.73
Solyc05g045950.1.1	Tomato	cytosol	18.4	60.67
VIT_04s0008g07090.t01	Wine grape	cytosol	8.52	55.56
CDX84993	Canola	plasma membrane	39.01	54.27
PGSC0003DMT400044033	Potato	mitochondrion	6.3	51.39
Bra025162.1-P	Field mustard	cytosol	58.09	44.29

Protein Annotations

EnsemblPlants:HORVU5Hr1G051850.3	EnsemblPlantsGene:HORVU5Hr1G051850	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:HEAT	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133
PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	PFAM:PF02985	PFAM:PF13646	PFscan:PS50077	SUPFAM:SSF48371
UniParc:UPI000B46E2BA	UniProt:A0A287R7K7	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	:	:

Description

No Description!

Coordinates

chrchr5H:+:404952265..404960465

Molecular Weight (calculated)

65531.9 Da

IEP (calculated)

4.693

GRAVY (calculated)

0.103

Length

587 amino acids

Sequence
(BLAST)

001: MAMVDEPLYP IAVLIDELKN EDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDE DEVLLAMAEE LGVFIPYVGG VEHAHVLLPP LETLSTVEET
101: CVRDKAVESL CRIGAQMKEN DIVDYFIPVV KRLAAGEWFT ARVSSCGLFH IAYPSATDPL KTELRTIYGQ LCQDDMPMVR RAAASNLGKF AATVEQSHLK
201: TEIMSIFDDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVA HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRAD LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LSPQLAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEQLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLEDKVF SIREAAANNL KRLAEEFGPE WAMQHIIPQV LEKINNPHYL YRMTILQAIS
501: LLAPVMGAEI TCQKLLPVVI NSSKDRVPNI KFNVAKVLQS LVPILDQSVA EKTVKPCLVE LSEDPDVDVR YYANQALQAC DQIMMSS

Best Arabidopsis Sequence Match ( AT3G25800.3 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.