Factsheet for HORVU3Hr1G073050.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G29195.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G29195.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G295400.1	Wheat	extracellular	75.38	77.37
TraesCS3B01G330000.1	Wheat	cytosol, extracellular	74.87	76.84
TraesCS3A01G306500.1	Wheat	cytosol, extracellular	76.41	76.8
Os01t0758500-01	Rice	cytosol	75.38	75.38
Zm00001d043399_P001	Maize	extracellular	71.28	70.2
EES03643	Sorghum	endoplasmic reticulum, extracellular	68.21	63.94
GSMUA_Achr6P26830_001	Banana	cytosol, endoplasmic reticulum, plastid	51.28	60.61
GSMUA_Achr4P08040_001	Banana	extracellular	50.77	58.58
CDX90174	Canola	cytosol, endoplasmic reticulum	48.21	54.97
Zm00001d012700_P001	Maize	extracellular	60.51	54.88
GSMUA_Achr6P22730_001	Banana	cytosol	45.64	53.94
KRH42866	Soybean	extracellular, plasma membrane	48.21	53.71
Bra030125.1-P	Field mustard	cytosol, extracellular	47.18	51.98
KRH58967	Soybean	cytosol, golgi	46.15	51.43
CDY43324	Canola	cytosol, endoplasmic reticulum	45.13	50.87
CDY15646	Canola	cytosol, extracellular	46.15	50.85
VIT_10s0003g01310.t01	Wine grape	extracellular	47.69	50.82
KRH11017	Soybean	extracellular	45.64	50.57
CDX94651	Canola	cytosol, extracellular	45.64	50.28
Bra010845.1-P	Field mustard	cytosol, endoplasmic reticulum	45.13	50.0
AT1G29195.1	Thale cress	cytosol, endoplasmic reticulum	49.23	49.74
Solyc02g076800.1.1	Tomato	extracellular	48.72	49.74
GSMUA_Achr7P25280_001	Banana	extracellular	44.1	49.43
KRH21271	Soybean	cytosol, nucleus, plastid	47.69	47.69
Solyc03g006160.1.1	Tomato	cytosol, extracellular, nucleus	43.08	46.41
PGSC0003DMT400011206	Potato	extracellular	43.59	44.5
HORVU4Hr1G055090.1	Barley	extracellular	32.31	37.06

Protein Annotations

EnsemblPlants:HORVU3Hr1G073050.1	EnsemblPlantsGene:HORVU3Hr1G073050	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF3	PFAM:PF14009
SEG:seg	UniParc:UPI000B478A41	UniProt:A0A287LMG1	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr3H:-:551757646..551760662

Molecular Weight (calculated)

20762.2 Da

IEP (calculated)

9.817

GRAVY (calculated)

-0.385

Length

195 amino acids

Sequence
(BLAST)

001: METIRCCIAC ILPCGALDVV RIVHSNGRVE EISEPVLAGE IMKAYPKHVL RKPPSTCPAD GGGGGIVVQK PVILPPNAEL QKGKIYFLMP VMAPPPDKAA
101: AKPKAPAAAS TPAPAARRRR RRKESGDAAA GVGGDGGNNA AAASQSAEGE KERLLANERY LSEIMKEKAS TARDRRRGRV AVWRPHLESI TEDDL

Best Arabidopsis Sequence Match ( AT1G29195.1 )
(BLAST)

001: MKETIRCCIA CILPCGALDV IRIVHSNGHV EEISGTITAS EIMKAHPKHV LKKPSSPTSD HDERDVISAT KIVIVPPEAE LQRGKIYFLM PATKSDKCAG
101: GGKIRREKSN ANAVVKKRSQ YRRQHRDGDE KCNGGESNDV KDKNYEKDLL ISSDRYLTEI LSEKVATQKD RRKGRVGVWR PHLESISEII TED

Arabidopsis Description

At1g29190/F28N24_12 [Source:UniProtKB/TrEMBL;Acc:Q9LP48]
SUBAcon: [endoplasmic reticulum,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.