Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G29195.1 | KRH03466 | AT3G47620.1 | 21798944 |
| AT1G29195.1 | KRH54542 | AT3G47620.1 | 21798944 |
| AT1G29195.1 | KRH56919 | AT3G47620.1 | 21798944 |
| AT1G29195.1 | KRH63357 | AT3G47620.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58967 | Soybean | cytosol, golgi | 66.48 | 66.86 |
| KRH21271 | Soybean | cytosol, nucleus, plastid | 73.86 | 66.67 |
| KRH42866 | Soybean | extracellular, plasma membrane | 61.93 | 62.29 |
| VIT_10s0003g01310.t01 | Wine grape | extracellular | 62.5 | 60.11 |
| Solyc03g006160.1.1 | Tomato | cytosol, extracellular, nucleus | 59.66 | 58.01 |
| CDX90174 | Canola | cytosol, endoplasmic reticulum | 55.68 | 57.31 |
| GSMUA_Achr6P26830_001 | Banana | cytosol, endoplasmic reticulum, plastid | 53.41 | 56.97 |
| Bra030125.1-P | Field mustard | cytosol, extracellular | 56.82 | 56.5 |
| CDY15646 | Canola | cytosol, extracellular | 56.82 | 56.5 |
| Solyc02g076800.1.1 | Tomato | extracellular | 60.8 | 56.02 |
| CDX94651 | Canola | cytosol, extracellular | 56.25 | 55.93 |
| PGSC0003DMT400011206 | Potato | extracellular | 59.09 | 54.45 |
| CDY43324 | Canola | cytosol, endoplasmic reticulum | 53.41 | 54.34 |
| Bra010845.1-P | Field mustard | cytosol, endoplasmic reticulum | 53.98 | 53.98 |
| AT1G29195.1 | Thale cress | cytosol, endoplasmic reticulum | 59.09 | 53.89 |
| GSMUA_Achr4P08040_001 | Banana | extracellular | 51.14 | 53.25 |
| GSMUA_Achr6P22730_001 | Banana | cytosol | 48.86 | 52.12 |
| TraesCS3A01G306500.1 | Wheat | cytosol, extracellular | 51.7 | 46.91 |
| Os01t0758500-01 | Rice | cytosol | 51.7 | 46.67 |
| GSMUA_Achr7P25280_001 | Banana | extracellular | 46.02 | 46.55 |
| TraesCS3B01G330000.1 | Wheat | cytosol, extracellular | 49.43 | 45.79 |
| HORVU3Hr1G073050.1 | Barley | cytosol, endoplasmic reticulum | 50.57 | 45.64 |
| KRG98199 | Soybean | extracellular | 42.61 | 45.45 |
| Zm00001d043399_P001 | Maize | extracellular | 51.14 | 45.45 |
| TraesCS3D01G295400.1 | Wheat | extracellular | 48.86 | 45.26 |
| EES03643 | Sorghum | endoplasmic reticulum, extracellular | 51.14 | 43.27 |
| KRH72764 | Soybean | extracellular | 41.48 | 42.69 |
| KRH30160 | Soybean | extracellular | 40.34 | 42.52 |
| KRH17122 | Soybean | extracellular, golgi | 39.77 | 41.92 |
| Zm00001d012700_P001 | Maize | extracellular | 50.57 | 41.4 |
Protein Annotations
| EMBL:ACUP02009171 | EnsemblPlants:KRH11017 | EnsemblPlantsGene:GLYMA_15G083000 | EntrezGene:100775708 | InterPro:DUF4228_plant | PANTHER:PTHR33052 |
| PANTHER:PTHR33052:SF3 | PFAM:PF14009 | ProteinID:KRH11017 | ProteinID:KRH11017.1 | SEG:seg | UniParc:UPI000233AE93 |
| UniProt:I1MES4 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:6340563..6342031
Molecular Weight (calculated)
19706.7 Da
IEP (calculated)
10.431
GRAVY (calculated)
-0.609
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNSIRCCIS CILPCGALDV IRIVHSNGRV EEISGTIKAS DVMKAHPKHV LKKPSSPSTQ DGVVPKIVVV PPDAELQRGK IYFLMPLPSP PSEKNNHLQR
101: SSSSGKKKRK EHHSDNRNIN NNNAISVANL LVSNERYLTE ILSEKVSTQR DRRRGRVAVW RPHLESISES PSPDYM
101: SSSSGKKKRK EHHSDNRNIN NNNAISVANL LVSNERYLTE ILSEKVSTQR DRRRGRVAVW RPHLESISES PSPDYM
001: MKETIRCCIA CILPCGALDV IRIVHSNGHV EEISGTITAS EIMKAHPKHV LKKPSSPTSD HDERDVISAT KIVIVPPEAE LQRGKIYFLM PATKSDKCAG
101: GGKIRREKSN ANAVVKKRSQ YRRQHRDGDE KCNGGESNDV KDKNYEKDLL ISSDRYLTEI LSEKVATQKD RRKGRVGVWR PHLESISEII TED
101: GGKIRREKSN ANAVVKKRSQ YRRQHRDGDE KCNGGESNDV KDKNYEKDLL ISSDRYLTEI LSEKVATQKD RRKGRVGVWR PHLESISEII TED
Arabidopsis Description
At1g29190/F28N24_12 [Source:UniProtKB/TrEMBL;Acc:Q9LP48]
SUBAcon: [endoplasmic reticulum,cytosol]
SUBAcon: [endoplasmic reticulum,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.