CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	64.85	72.3
KRH30160	Soybean	extracellular	72.73	71.86
KRH17122	Soybean	extracellular, golgi	63.64	62.87
KRH72764	Soybean	extracellular	64.85	62.57
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	52.73	61.7
Bra015540.1-P	Field mustard	extracellular, golgi	63.03	61.54
Solyc06g007370.1.1	Tomato	extracellular	56.97	59.12
CDY10237	Canola	extracellular, golgi	60.0	58.58
CDY54890	Canola	extracellular, golgi	60.0	58.58
CDY24020	Canola	extracellular	55.76	58.23
CDX84850	Canola	extracellular	55.76	58.23
CDX84851	Canola	extracellular	55.76	58.23
CDY02050	Canola	extracellular	56.36	58.12
Zm00001d009826_P001	Maize	extracellular	51.52	57.82
GSMUA_Achr11P...	Banana	cytosol, extracellular	49.7	57.34
CDY15595	Canola	extracellular, golgi	56.97	57.32
CDX97836	Canola	extracellular	55.76	57.14
PGSC0003DMT400052957	Potato	extracellular	56.97	56.97
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	50.3	56.85
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	47.88	56.83
AT1G06980.1	Thale cress	extracellular, golgi	57.58	56.21
Bra030668.1-P	Field mustard	extracellular, golgi	55.76	56.1
Bra031549.1-P	Field mustard	extracellular, golgi	56.36	55.69
CDY09944	Canola	extracellular, golgi	55.76	55.09
TraesCS1D01G112900.1	Wheat	extracellular	56.36	54.71
Bra018326.1-P	Field mustard	extracellular	58.79	54.49
Bra022784.1-P	Field mustard	extracellular	57.58	53.98
CDX86506	Canola	extracellular, golgi	54.55	53.57
AT2G30230.1	Thale cress	extracellular	56.97	53.11
TraesCS1B01G131700.1	Wheat	extracellular	54.55	52.94
TraesCS1A01G111500.1	Wheat	extracellular	54.55	52.94
CDY29687	Canola	extracellular	56.97	52.51
Bra021621.1-P	Field mustard	extracellular	56.36	51.96
GSMUA_Achr11P...	Banana	cytosol	52.12	51.81
EER95013	Sorghum	extracellular, vacuole	52.12	51.5
EES17778	Sorghum	extracellular, golgi	52.73	50.58
Zm00001d028798_P001	Maize	extracellular, vacuole	49.09	50.31
Os05t0165200-00	Rice	extracellular	50.3	48.82
GSMUA_Achr9P04640_001	Banana	extracellular	41.82	45.39
HORVU4Hr1G055090.1	Barley	extracellular	46.67	45.29
TraesCS4D01G190800.1	Wheat	extracellular	46.67	45.29
Zm00001d039735_P001	Maize	extracellular	49.09	45.25
Os03t0298100-00	Rice	cytosol, extracellular	48.48	44.94
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	46.06	44.71
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	46.06	44.71
TraesCS4A01G114800.1	Wheat	extracellular	46.06	44.19
EES02407	Sorghum	extracellular, golgi, plasma membrane	49.09	44.02
TraesCS3D01G099200.1	Wheat	extracellular	43.64	42.86
KRH11017	Soybean	extracellular	45.45	42.61
TraesCS3A01G098800.1	Wheat	extracellular	43.64	42.35
Os05t0474700-01	Rice	extracellular	43.64	42.11
Os01t0826800-01	Rice	vacuole	43.64	42.11
TraesCS3B01G115000.1	Wheat	extracellular	43.03	42.01
TraesCS3D01G341300.1	Wheat	extracellular	41.82	41.57
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	44.24	41.24
TraesCS3B01G379600.1	Wheat	extracellular	40.61	41.1
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	43.64	40.68
TraesCS1D01G292900.1	Wheat	extracellular	43.03	40.57
KRH58967	Soybean	cytosol, golgi	43.03	40.57
EES18380	Sorghum	extracellular	45.45	40.32
EES03819	Sorghum	extracellular	43.03	40.11
KRH42866	Soybean	extracellular, plasma membrane	41.82	39.43
Zm00001d043024_P001	Maize	extracellular	40.61	39.41
TraesCS3A01G347700.1	Wheat	extracellular	40.0	39.29
Zm00001d038450_P001	Maize	vacuole	41.82	39.2
Zm00001d012480_P001	Maize	extracellular	40.61	38.51
KRH21271	Soybean	cytosol, nucleus, plastid	45.45	38.46
Os04t0630700-01	Rice	cytosol	20.61	31.48

Protein Annotations

EMBL:ACUP02010851	EMBL:BT090182	EnsemblPlants:KRG98199	EnsemblPlantsGene:GLYMA_18G057000	EntrezGene:100306192	InterPro:DUF4228_plant
PANTHER:PTHR33052	PANTHER:PTHR33052:SF26	PFAM:PF14009	ProteinID:KRG98199	ProteinID:KRG98199.1	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI0001B1578D	UniProt:C6SYD4	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr18:-:4988906..4990187

Molecular Weight (calculated)

18092.0 Da

IEP (calculated)

10.296

GRAVY (calculated)

-0.440

Length

165 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRPITAG EVLKANPNHV LSKPSSQGVV RRILILSPET ELKRGSIYFL IPESSLPENK RHAGKGSIGG
101: DSGIKKKAST MKSNKGSSDV DYSSLPQGYL KVTHKGSKEK RSSCRDRRKG RIGIWRPHLE SILED

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.