CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018326.1-P	Field mustard	extracellular	95.62	85.96
CDX97836	Canola	extracellular	86.25	85.71
CDX84850	Canola	extracellular	78.75	79.75
CDX84851	Canola	extracellular	78.75	79.75
CDY24020	Canola	extracellular	78.12	79.11
CDY29687	Canola	extracellular	86.25	77.09
AT2G30230.1	Thale cress	extracellular	80.0	72.32
CDY15595	Canola	extracellular, golgi	71.25	69.51
CDY09944	Canola	extracellular, golgi	71.25	68.26
CDY54890	Canola	extracellular, golgi	70.62	66.86
CDY10237	Canola	extracellular, golgi	70.0	66.27
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	60.0	64.86
CDX86506	Canola	extracellular, golgi	67.5	64.29
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	52.5	59.57
KRH17122	Soybean	extracellular, golgi	60.62	58.08
KRH30160	Soybean	extracellular	60.0	57.48
KRG98199	Soybean	extracellular	58.12	56.36
Solyc06g007370.1.1	Tomato	extracellular	55.62	55.97
GSMUA_Achr11P...	Banana	cytosol, extracellular	49.38	55.24
PGSC0003DMT400052957	Potato	extracellular	56.88	55.15
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	48.75	53.42
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	46.25	53.24
Zm00001d009826_P001	Maize	extracellular	48.12	52.38
KRH72764	Soybean	extracellular	55.0	51.46
EES17778	Sorghum	extracellular, golgi	53.75	50.0
TraesCS1D01G112900.1	Wheat	extracellular	52.5	49.41
TraesCS1B01G131700.1	Wheat	extracellular	52.5	49.41
TraesCS1A01G111500.1	Wheat	extracellular	52.5	49.41
GSMUA_Achr11P...	Banana	cytosol	50.62	48.8
Zm00001d028798_P001	Maize	extracellular, vacuole	48.75	48.45
TraesCS4D01G190800.1	Wheat	extracellular	50.62	47.65
Os05t0165200-00	Rice	extracellular	50.62	47.65
EER95013	Sorghum	extracellular, vacuole	49.38	47.31
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	50.0	47.06
HORVU4Hr1G055090.1	Barley	extracellular	50.0	47.06
TraesCS4A01G114800.1	Wheat	extracellular	50.0	46.51
Os03t0298100-00	Rice	cytosol, extracellular	50.62	45.51
Zm00001d039735_P001	Maize	extracellular	48.75	43.58
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	46.25	43.53
EES02407	Sorghum	extracellular, golgi, plasma membrane	49.38	42.93
GSMUA_Achr9P04640_001	Banana	extracellular	40.62	42.76
Os01t0826800-01	Rice	vacuole	45.0	42.11
TraesCS3B01G115000.1	Wheat	extracellular	44.38	42.01
TraesCS3A01G098800.1	Wheat	extracellular	44.38	41.76
TraesCS3D01G099200.1	Wheat	extracellular	43.75	41.67
Zm00001d043024_P001	Maize	extracellular	42.5	40.0
CDY43324	Canola	cytosol, endoplasmic reticulum	43.12	39.88
CDX90174	Canola	cytosol, endoplasmic reticulum	42.5	39.77
Os05t0474700-01	Rice	extracellular	42.5	39.77
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	43.75	39.55
EES18380	Sorghum	extracellular	45.62	39.25
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	43.12	38.98
CDX94651	Canola	cytosol, extracellular	42.5	38.42
EES03819	Sorghum	extracellular	42.5	38.42
Zm00001d012480_P001	Maize	extracellular	41.25	37.93
TraesCS1D01G292900.1	Wheat	extracellular	41.25	37.71
TraesCS3B01G379600.1	Wheat	extracellular	38.12	37.42
CDY15646	Canola	cytosol, extracellular	41.25	37.29
Zm00001d038450_P001	Maize	vacuole	40.62	36.93
TraesCS3A01G347700.1	Wheat	extracellular	38.75	36.9
TraesCS3D01G341300.1	Wheat	extracellular	37.5	36.14
Os04t0630700-01	Rice	cytosol	20.0	29.63

Protein Annotations

EnsemblPlants:CDY02050	EnsemblPlantsGene:GSBRNA2T00113404001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26	PFAM:PF14009
ProteinID:CDY02050	ProteinID:CDY02050.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EEEF1F	MapMan:35.2

Description

BnaC04g14510D

Coordinates

chrLK031931:+:887967..888503

Molecular Weight (calculated)

17922.8 Da

IEP (calculated)

8.614

GRAVY (calculated)

-0.346

Length

160 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITRPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSLPEKK KTKKKKDVQR
101: RRKTLGNAND INSNHMVSTS NKDLDLTLCE KYLEDVMLHS RSASVSMWQP HLDSISEDFN

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.