Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0165600-00 | Rice | extracellular, golgi, mitochondrion, nucleus | 52.78 | 33.53 |
| EES02407 | Sorghum | extracellular, golgi, plasma membrane | 51.85 | 30.43 |
| TraesCS3A01G098800.1 | Wheat | extracellular | 45.37 | 28.82 |
| Zm00001d039735_P001 | Maize | extracellular | 47.22 | 28.49 |
| TraesCS3B01G115000.1 | Wheat | extracellular | 44.44 | 28.4 |
| TraesCS3D01G099200.1 | Wheat | extracellular | 42.59 | 27.38 |
| Os05t0165200-00 | Rice | extracellular | 39.81 | 25.29 |
| GSMUA_Achr6P32750_001 | Banana | extracellular, vacuole | 27.78 | 21.28 |
| VIT_06s0004g07460.t01 | Wine grape | extracellular, golgi | 28.7 | 20.95 |
| GSMUA_Achr5P28030_001 | Banana | cytosol, extracellular | 26.85 | 20.86 |
| KRG98199 | Soybean | extracellular | 31.48 | 20.61 |
| Os05t0474700-01 | Rice | extracellular | 32.41 | 20.47 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 26.85 | 20.28 |
| Os03t0298100-00 | Rice | cytosol, extracellular | 33.33 | 20.22 |
| CDY02050 | Canola | extracellular | 29.63 | 20.0 |
| PGSC0003DMT400052957 | Potato | extracellular | 30.56 | 20.0 |
| CDX86506 | Canola | extracellular, golgi | 30.56 | 19.64 |
| CDY15595 | Canola | extracellular, golgi | 29.63 | 19.51 |
| Bra030668.1-P | Field mustard | extracellular, golgi | 29.63 | 19.51 |
| CDY09944 | Canola | extracellular, golgi | 29.63 | 19.16 |
| Bra031549.1-P | Field mustard | extracellular, golgi | 29.63 | 19.16 |
| KRH30160 | Soybean | extracellular | 29.63 | 19.16 |
| CDY10237 | Canola | extracellular, golgi | 29.63 | 18.93 |
| Solyc06g007370.1.1 | Tomato | extracellular | 27.78 | 18.87 |
| Os01t0826800-01 | Rice | vacuole | 29.63 | 18.71 |
| Bra018326.1-P | Field mustard | extracellular | 30.56 | 18.54 |
| AT1G06980.1 | Thale cress | extracellular, golgi | 28.7 | 18.34 |
| AT2G30230.1 | Thale cress | extracellular | 29.63 | 18.08 |
| CDX97836 | Canola | extracellular | 26.85 | 18.01 |
| CDY54890 | Canola | extracellular, golgi | 27.78 | 17.75 |
| CDY24020 | Canola | extracellular | 25.93 | 17.72 |
| KRH72764 | Soybean | extracellular | 27.78 | 17.54 |
| Bra021621.1-P | Field mustard | extracellular | 27.78 | 16.76 |
| Bra015540.1-P | Field mustard | extracellular, golgi | 25.93 | 16.57 |
| CDY29687 | Canola | extracellular | 26.85 | 16.2 |
| KRH17122 | Soybean | extracellular, golgi | 25.0 | 16.17 |
| CDX84850 | Canola | extracellular | 23.15 | 15.82 |
| CDX84851 | Canola | extracellular | 23.15 | 15.82 |
| Bra022784.1-P | Field mustard | extracellular | 25.0 | 15.34 |
| GSMUA_Achr9P04640_001 | Banana | extracellular | 21.3 | 15.13 |
| Os01t0758500-01 | Rice | cytosol | 24.07 | 13.33 |
Protein Annotations
| EnsemblPlants:Os04t0630700-01 | EnsemblPlantsGene:Os04g0630700 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF30 | PFAM:PF14009 |
| ProteinID:BAS91167.1 | ProteinID:EAZ32089.1 | SEG:seg | UniParc:UPI00006E26D5 | UniProt:A3AXQ0 | MapMan:35.2 |
Description
Similar to H0323C08.17 protein. (Os04t0630700-01)
Coordinates
chr4:+:32083281..32083982
Molecular Weight (calculated)
11857.0 Da
IEP (calculated)
9.496
GRAVY (calculated)
-0.727
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRIHIVSPE SKLECGEIYF LIPAASVPDA KRRTSTGGAA GHGHHVRSKS EGNAAVADWL GSQCSASPET TRMMRVQKQH HHQHRRRMST GSHASPWQPH
101: LSCITEDP
101: LSCITEDP
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.