Factsheet for TraesCS3B01G115000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G098800.1	Wheat	extracellular	72.78	72.35
TraesCS3D01G099200.1	Wheat	extracellular	71.01	71.43
Zm00001d039735_P001	Maize	extracellular	62.72	59.22
EES02407	Sorghum	extracellular, golgi, plasma membrane	61.54	56.52
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	45.56	54.61
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	44.38	50.68
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	41.42	50.36
GSMUA_Achr11P...	Banana	cytosol, extracellular	40.24	47.55
TraesCS1B01G131700.1	Wheat	extracellular	46.75	46.47
Bra030668.1-P	Field mustard	extracellular, golgi	43.79	45.12
CDY24020	Canola	extracellular	42.01	44.94
Solyc06g007370.1.1	Tomato	extracellular	42.01	44.65
Os04t0630700-01	Rice	cytosol	28.4	44.44
CDY02050	Canola	extracellular	42.01	44.38
CDX84851	Canola	extracellular	41.42	44.3
CDX84850	Canola	extracellular	41.42	44.3
KRH17122	Soybean	extracellular, golgi	43.2	43.71
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	43.79	43.53
CDY10237	Canola	extracellular, golgi	43.2	43.2
CDY54890	Canola	extracellular, golgi	43.2	43.2
KRG98199	Soybean	extracellular	42.01	43.03
CDX86506	Canola	extracellular, golgi	42.6	42.86
CDY15595	Canola	extracellular, golgi	41.42	42.68
AT1G06980.1	Thale cress	extracellular, golgi	42.6	42.6
Bra031549.1-P	Field mustard	extracellular, golgi	42.01	42.52
CDY09944	Canola	extracellular, golgi	42.01	42.52
CDX97836	Canola	extracellular	40.24	42.24
KRH30160	Soybean	extracellular	41.42	41.92
PGSC0003DMT400052957	Potato	extracellular	40.83	41.82
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	43.79	41.81
TraesCS3B01G379600.1	Wheat	extracellular	40.24	41.72
GSMUA_Achr9P04640_001	Banana	extracellular	36.69	40.79
KRH72764	Soybean	extracellular	40.83	40.35
Bra022784.1-P	Field mustard	extracellular	42.01	40.34
Bra015540.1-P	Field mustard	extracellular, golgi	40.24	40.24
Bra018326.1-P	Field mustard	extracellular	42.01	39.89
AT2G30230.1	Thale cress	extracellular	40.83	38.98
Bra021621.1-P	Field mustard	extracellular	40.24	37.99
CDY29687	Canola	extracellular	40.24	37.99
TraesCS3B01G330000.1	Wheat	cytosol, extracellular	36.09	32.11

Protein Annotations

EnsemblPlants:TraesCS3B01G115000.1	EnsemblPlantsGene:TraesCS3B01G115000	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF30	PFAM:PF14009
SEG:seg	SignalP:SignalP-noTM	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3B:-:81333199..81334211

Molecular Weight (calculated)

18460.0 Da

IEP (calculated)

9.819

GRAVY (calculated)

-0.578

Length

169 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL VRIVHLSGRV DEYGRAVLAG EVLAAHPNHV LSRPCGSRQQ GGPRIVIIVS PEAELERGEI YFLLPAASVP ADAKKKTKTK
101: REPSPGAAAE EDRRHHRHHV RSKSEGSAAT AAVEGRQQQQ QQQQHRRRMS TGSHATSWHP HLARIAEDP

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.