Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G298300.1 | Wheat | extracellular, vacuole | 97.74 | 97.74 |
| TraesCS1D01G292900.1 | Wheat | extracellular | 83.05 | 84.0 |
| Os05t0474700-01 | Rice | extracellular | 70.06 | 72.51 |
| Zm00001d038450_P001 | Maize | vacuole | 63.84 | 64.2 |
| EES18380 | Sorghum | extracellular | 63.28 | 60.22 |
| GSMUA_Achr5P28030_001 | Banana | cytosol, extracellular | 45.2 | 57.55 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 44.07 | 54.55 |
| TraesCS3B01G379600.1 | Wheat | extracellular | 49.72 | 53.99 |
| GSMUA_Achr6P32750_001 | Banana | extracellular, vacuole | 42.94 | 53.9 |
| VIT_06s0004g07460.t01 | Wine grape | extracellular, golgi | 41.24 | 49.32 |
| Solyc06g007370.1.1 | Tomato | extracellular | 40.68 | 45.28 |
| KRH72764 | Soybean | extracellular | 43.5 | 45.03 |
| GSMUA_Achr9P04640_001 | Banana | extracellular | 38.42 | 44.74 |
| KRG98199 | Soybean | extracellular | 41.24 | 44.24 |
| TraesCS1B01G131700.1 | Wheat | extracellular | 42.37 | 44.12 |
| TraesCS3B01G115000.1 | Wheat | extracellular | 41.81 | 43.79 |
| CDY02050 | Canola | extracellular | 39.55 | 43.75 |
| KRH17122 | Soybean | extracellular, golgi | 41.24 | 43.71 |
| TraesCS4B01G189400.1 | Wheat | extracellular, vacuole | 41.81 | 43.53 |
| CDX97836 | Canola | extracellular | 39.55 | 43.48 |
| CDX84850 | Canola | extracellular | 38.42 | 43.04 |
| CDX84851 | Canola | extracellular | 38.42 | 43.04 |
| CDY24020 | Canola | extracellular | 38.42 | 43.04 |
| PGSC0003DMT400052957 | Potato | extracellular | 40.11 | 43.03 |
| Bra015540.1-P | Field mustard | extracellular, golgi | 40.68 | 42.6 |
| AT1G06980.1 | Thale cress | extracellular, golgi | 40.11 | 42.01 |
| CDY10237 | Canola | extracellular, golgi | 40.11 | 42.01 |
| Bra031549.1-P | Field mustard | extracellular, golgi | 39.55 | 41.92 |
| CDY09944 | Canola | extracellular, golgi | 39.55 | 41.92 |
| KRH30160 | Soybean | extracellular | 39.55 | 41.92 |
| AT2G30230.1 | Thale cress | extracellular | 41.24 | 41.24 |
| CDX86506 | Canola | extracellular, golgi | 38.98 | 41.07 |
| Bra022784.1-P | Field mustard | extracellular | 40.68 | 40.91 |
| Bra030668.1-P | Field mustard | extracellular, golgi | 37.85 | 40.85 |
| CDY54890 | Canola | extracellular, golgi | 38.98 | 40.83 |
| Bra018326.1-P | Field mustard | extracellular | 40.68 | 40.45 |
| CDY29687 | Canola | extracellular | 40.68 | 40.22 |
| Bra021621.1-P | Field mustard | extracellular | 40.11 | 39.66 |
| CDY15595 | Canola | extracellular, golgi | 36.72 | 39.63 |
| TraesCS3B01G330000.1 | Wheat | cytosol, extracellular | 33.33 | 31.05 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G307800.1 | EnsemblPlantsGene:TraesCS1B01G307800 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF16 | PFAM:PF14009 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1B:+:530610163..530611071
Molecular Weight (calculated)
19048.7 Da
IEP (calculated)
10.091
GRAVY (calculated)
-0.429
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSLRCCLA CMLPCGALDV VRVVHLSGHV DEFTCPLIAS DVLAAHPSHA LTAAGSAGAA RRIVIVSPDS ELKRGRIYFL IPTACSAPAA ELKRPKQQQQ
101: QQGHGACQSK TKRRHGHGHR KGGTAVAAAA STAEQDNYLR ELLSEKRESG HRRRRSSSAR AGVWRPRLES IAEEPSD
101: QQGHGACQSK TKRRHGHGHR KGGTAVAAAA STAEQDNYLR ELLSEKRESG HRRRRSSSAR AGVWRPRLES IAEEPSD
001: MGNTSSCAPL IISTNSSSGV VKILAPFTGT LEVFSKPIKT SDIVSRHSGH FITDSTLLQI SHRVTAVSPD EYLRPRRHLY LLLPTDMLFS VLTQEELSLI
101: SNKAAETLNK SRYNHLKRIF PVCIFPMTGD RRRNPSSVNE DRAHDGVEIR ETLDEKVLYE SKHGSWRPKL ETIVES
101: SNKAAETLNK SRYNHLKRIF PVCIFPMTGD RRRNPSSVNE DRAHDGVEIR ETLDEKVLYE SKHGSWRPKL ETIVES
Arabidopsis Description
DUF4228 domain protein [Source:UniProtKB/TrEMBL;Acc:Q9LE02]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.