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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g007370.1.1 Tomato extracellular 76.97 79.87
VIT_06s0004g07460.t01 Wine grape extracellular, golgi 56.36 62.84
GSMUA_Achr6P32750_001 Banana extracellular, vacuole 49.7 58.16
Zm00001d009826_P001 Maize extracellular 50.91 57.14
KRG98199 Soybean extracellular 56.97 56.97
CDY02050 Canola extracellular 55.15 56.88
CDX84850 Canola extracellular 53.94 56.33
CDX84851 Canola extracellular 53.94 56.33
KRH30160 Soybean extracellular 56.36 55.69
GSMUA_Achr5P28030_001 Banana cytosol, extracellular 46.67 55.4
CDX97836 Canola extracellular 53.94 55.28
GSMUA_Achr11P... Banana cytosol, extracellular 47.88 55.24
Bra031549.1-P Field mustard extracellular, golgi 54.55 53.89
KRH17122 Soybean extracellular, golgi 54.55 53.89
CDY54890 Canola extracellular, golgi 55.15 53.85
CDY24020 Canola extracellular 51.52 53.8
Bra030668.1-P Field mustard extracellular, golgi 53.33 53.66
CDY15595 Canola extracellular, golgi 53.33 53.66
GSMUA_Achr5P29500_001 Banana extracellular, vacuole 47.27 53.42
CDY09944 Canola extracellular, golgi 53.94 53.29
Bra015540.1-P Field mustard extracellular, golgi 54.55 53.25
AT1G06980.1 Thale cress extracellular, golgi 54.55 53.25
Bra018326.1-P Field mustard extracellular 56.97 52.81
AT2G30230.1 Thale cress extracellular 56.36 52.54
CDY10237 Canola extracellular, golgi 53.33 52.07
KRH72764 Soybean extracellular 53.94 52.05
CDX86506 Canola extracellular, golgi 52.73 51.79
TraesCS1D01G112900.1 Wheat extracellular 53.33 51.76
TraesCS1B01G131700.1 Wheat extracellular 52.73 51.18
TraesCS1A01G111500.1 Wheat extracellular 52.73 51.18
EES17778 Sorghum extracellular, golgi 53.33 51.16
Bra022784.1-P Field mustard extracellular 54.55 51.14
CDY29687 Canola extracellular 55.15 50.84
Bra021621.1-P Field mustard extracellular 54.55 50.28
Os05t0165200-00 Rice extracellular 51.52 50.0
EER95013 Sorghum extracellular, vacuole 50.3 49.7
GSMUA_Achr11P... Banana cytosol 49.7 49.4
Zm00001d028798_P001 Maize extracellular, vacuole 47.88 49.07
HORVU4Hr1G055090.1 Barley extracellular 48.48 47.06
TraesCS4A01G114800.1 Wheat extracellular 48.48 46.51
Os03t0298100-00 Rice cytosol, extracellular 49.7 46.07
TraesCS4D01G190800.1 Wheat extracellular 47.27 45.88
TraesCS4B01G189400.1 Wheat extracellular, vacuole 46.67 45.29
GSMUA_Achr9P04640_001 Banana extracellular 40.61 44.08
EES02407 Sorghum extracellular, golgi, plasma membrane 47.27 42.39
Os01t0165600-00 Rice extracellular, golgi, mitochondrion, nucleus 43.64 42.35
Zm00001d043024_P001 Maize extracellular 43.64 42.35
Os05t0474700-01 Rice extracellular 43.64 42.11
Os01t0826800-01 Rice vacuole 43.64 42.11
Zm00001d039735_P001 Maize extracellular 44.85 41.34
TraesCS3D01G099200.1 Wheat extracellular 41.82 41.07
TraesCS3B01G115000.1 Wheat extracellular 41.82 40.83
TraesCS3A01G098800.1 Wheat extracellular 41.82 40.59
TraesCS1B01G307800.1 Wheat extracellular, vacuole 43.03 40.11
TraesCS1D01G292900.1 Wheat extracellular 42.42 40.0
TraesCS3A01G347700.1 Wheat extracellular 40.61 39.88
TraesCS3B01G379600.1 Wheat extracellular 39.39 39.88
TraesCS1A01G298300.1 Wheat extracellular, vacuole 42.42 39.55
Zm00001d038450_P001 Maize vacuole 41.82 39.2
EES03819 Sorghum extracellular 41.82 38.98
EES18380 Sorghum extracellular 43.03 38.17
TraesCS3D01G341300.1 Wheat extracellular 38.18 37.95
Zm00001d012480_P001 Maize extracellular 37.58 35.63
PGSC0003DMT400011206 Potato extracellular 41.21 35.6
Os04t0630700-01 Rice cytosol 20.0 30.56
Protein Annotations
EnsemblPlants:PGSC0003DMT400052957EnsemblPlantsGene:PGSC0003DMG400020549EntrezGene:102578509InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF26
PFAM:PF14009PGSC:PGSC0003DMG400020549RefSeq:XP_006344076.1SEG:segSignalP:SignalP-noTMUniParc:UPI00029613E7
UniProt:M1BU66MapMan:35.2::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400020549]
Coordinates
chr6:-:2913382..2914356
Molecular Weight (calculated)
18170.1 Da
IEP (calculated)
10.315
GRAVY (calculated)
-0.379
Length
165 amino acids
Sequence
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV EEITSPITAY EVLKNYPNHV LSKPCSQGTM ARRILILSPE SELKRGSIYF LIPASSVPQK KKSGITSSSI
101: KKSPKNTITT TKSTNNKKCH ISIPDDHDFS SDSTMPKLKK SSSHRRSKSG KVVVWRPHLT SISED
Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.