CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84851	Canola	extracellular	100.0	100.0
CDY24020	Canola	extracellular	91.14	91.14
Bra022784.1-P	Field mustard	extracellular	96.84	86.93
CDX97836	Canola	extracellular	81.65	80.12
CDY02050	Canola	extracellular	79.75	78.75
CDY29687	Canola	extracellular	81.01	71.51
AT2G30230.1	Thale cress	extracellular	75.95	67.8
CDY15595	Canola	extracellular, golgi	68.35	65.85
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	60.13	64.19
CDY09944	Canola	extracellular, golgi	67.09	63.47
CDY10237	Canola	extracellular, golgi	67.72	63.31
CDY54890	Canola	extracellular, golgi	67.72	63.31
CDX86506	Canola	extracellular, golgi	64.56	60.71
KRH30160	Soybean	extracellular	59.49	56.29
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	50.0	56.03
KRG98199	Soybean	extracellular	58.23	55.76
KRH17122	Soybean	extracellular, golgi	58.86	55.69
Solyc06g007370.1.1	Tomato	extracellular	55.7	55.35
PGSC0003DMT400052957	Potato	extracellular	56.33	53.94
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	46.84	53.24
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	48.73	52.74
GSMUA_Achr11P...	Banana	cytosol, extracellular	46.2	51.05
Zm00001d009826_P001	Maize	extracellular	46.84	50.34
KRH72764	Soybean	extracellular	53.8	49.71
TraesCS1B01G131700.1	Wheat	extracellular	53.16	49.41
TraesCS1A01G111500.1	Wheat	extracellular	53.16	49.41
TraesCS1D01G112900.1	Wheat	extracellular	51.9	48.24
EES17778	Sorghum	extracellular, golgi	51.9	47.67
GSMUA_Achr11P...	Banana	cytosol	50.0	47.59
HORVU4Hr1G055090.1	Barley	extracellular	49.37	45.88
TraesCS4D01G190800.1	Wheat	extracellular	49.37	45.88
Os05t0165200-00	Rice	extracellular	49.37	45.88
Zm00001d028798_P001	Maize	extracellular, vacuole	46.2	45.34
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	48.73	45.29
EER95013	Sorghum	extracellular, vacuole	47.47	44.91
Os03t0298100-00	Rice	cytosol, extracellular	50.0	44.38
TraesCS4A01G114800.1	Wheat	extracellular	47.47	43.6
TraesCS3A01G098800.1	Wheat	extracellular	46.2	42.94
TraesCS3D01G099200.1	Wheat	extracellular	45.57	42.86
Os01t0826800-01	Rice	vacuole	45.57	42.11
GSMUA_Achr9P04640_001	Banana	extracellular	39.87	41.45
TraesCS3B01G115000.1	Wheat	extracellular	44.3	41.42
Zm00001d039735_P001	Maize	extracellular	46.84	41.34
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	44.3	41.18
CDX90174	Canola	cytosol, endoplasmic reticulum	43.67	40.35
EES02407	Sorghum	extracellular, golgi, plasma membrane	46.84	40.22
Os05t0474700-01	Rice	extracellular	43.04	39.77
Zm00001d043024_P001	Maize	extracellular	42.41	39.41
CDY43324	Canola	cytosol, endoplasmic reticulum	43.04	39.31
EES03819	Sorghum	extracellular	43.67	38.98
EES18380	Sorghum	extracellular	45.57	38.71
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	43.04	38.42
Zm00001d012480_P001	Maize	extracellular	41.77	37.93
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	42.41	37.85
TraesCS1D01G292900.1	Wheat	extracellular	41.77	37.71
Zm00001d038450_P001	Maize	vacuole	41.77	37.5
TraesCS3B01G379600.1	Wheat	extracellular	37.97	36.81
CDX94651	Canola	cytosol, extracellular	41.14	36.72
CDY15646	Canola	cytosol, extracellular	39.87	35.59
TraesCS3D01G341300.1	Wheat	extracellular	37.34	35.54
TraesCS3A01G347700.1	Wheat	extracellular	37.34	35.12
Os04t0630700-01	Rice	cytosol	15.82	23.15

Protein Annotations

EnsemblPlants:CDX84850	EnsemblPlantsGene:GSBRNA2T00142167001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26	PFAM:PF14009
ProteinID:CDX84850	ProteinID:CDX84850.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EEC43D	MapMan:35.2

Description

BnaA03g13800D

Coordinates

chrLK031838:-:1554732..1555262

Molecular Weight (calculated)

17702.7 Da

IEP (calculated)

9.094

GRAVY (calculated)

-0.276

Length

158 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITRPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSLPEKK KTKKKKEVQR
101: RKKSPENAND IKIHHMVSTS KDLDLTLCEK YLEDVMLSSR PASVSLWRPQ LASISEDF

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.