Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028798_P001 | Maize | extracellular, vacuole | 76.65 | 79.5 |
| TraesCS4D01G190800.1 | Wheat | extracellular | 65.87 | 64.71 |
| TraesCS4B01G189400.1 | Wheat | extracellular, vacuole | 65.27 | 64.12 |
| TraesCS4A01G114800.1 | Wheat | extracellular | 65.87 | 63.95 |
| HORVU4Hr1G055090.1 | Barley | extracellular | 64.67 | 63.53 |
| Os03t0298100-00 | Rice | cytosol, extracellular | 66.47 | 62.36 |
| VIT_06s0004g07460.t01 | Wine grape | extracellular, golgi | 54.49 | 61.49 |
| GSMUA_Achr5P28030_001 | Banana | cytosol, extracellular | 50.3 | 60.43 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 50.9 | 59.44 |
| GSMUA_Achr6P32750_001 | Banana | extracellular, vacuole | 49.1 | 58.16 |
| KRG98199 | Soybean | extracellular | 51.5 | 52.12 |
| Solyc06g007370.1.1 | Tomato | extracellular | 49.1 | 51.57 |
| EES17778 | Sorghum | extracellular, golgi | 52.1 | 50.58 |
| CDX97836 | Canola | extracellular | 48.5 | 50.31 |
| PGSC0003DMT400052957 | Potato | extracellular | 49.7 | 50.3 |
| Bra015540.1-P | Field mustard | extracellular, golgi | 50.9 | 50.3 |
| CDY10237 | Canola | extracellular, golgi | 50.3 | 49.7 |
| CDY02050 | Canola | extracellular | 47.31 | 49.38 |
| GSMUA_Achr9P04640_001 | Banana | extracellular | 44.91 | 49.34 |
| KRH30160 | Soybean | extracellular | 49.1 | 49.1 |
| KRH17122 | Soybean | extracellular, golgi | 49.1 | 49.1 |
| CDY15595 | Canola | extracellular, golgi | 47.9 | 48.78 |
| Bra030668.1-P | Field mustard | extracellular, golgi | 47.9 | 48.78 |
| CDY24020 | Canola | extracellular | 46.11 | 48.73 |
| CDY54890 | Canola | extracellular, golgi | 49.1 | 48.52 |
| CDX86506 | Canola | extracellular, golgi | 48.5 | 48.21 |
| AT1G06980.1 | Thale cress | extracellular, golgi | 48.5 | 47.93 |
| CDY09944 | Canola | extracellular, golgi | 47.9 | 47.9 |
| CDX84851 | Canola | extracellular | 44.91 | 47.47 |
| CDX84850 | Canola | extracellular | 44.91 | 47.47 |
| Bra031549.1-P | Field mustard | extracellular, golgi | 47.31 | 47.31 |
| Bra018326.1-P | Field mustard | extracellular | 49.7 | 46.63 |
| CDY29687 | Canola | extracellular | 49.7 | 46.37 |
| AT2G30230.1 | Thale cress | extracellular | 49.1 | 46.33 |
| KRH72764 | Soybean | extracellular | 47.31 | 46.2 |
| Bra021621.1-P | Field mustard | extracellular | 49.1 | 45.81 |
| Bra022784.1-P | Field mustard | extracellular | 47.31 | 44.89 |
| EES02407 | Sorghum | extracellular, golgi, plasma membrane | 49.1 | 44.57 |
| EES18380 | Sorghum | extracellular | 49.1 | 44.09 |
| EES03819 | Sorghum | extracellular | 43.71 | 41.24 |
| EES03643 | Sorghum | endoplasmic reticulum, extracellular | 37.72 | 30.29 |
Protein Annotations
| EnsemblPlants:EER95013 | EnsemblPlantsGene:SORBI_3001G403000 | EntrezGene:8084022 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF7 |
| PFAM:PF14009 | ProteinID:EER95013 | ProteinID:EER95013.1 | RefSeq:XP_002468015.1 | SEG:seg | UniParc:UPI0001A82FCD |
| UniProt:C5WNF7 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:68821538..68822546
Molecular Weight (calculated)
18466.2 Da
IEP (calculated)
10.358
GRAVY (calculated)
-0.511
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSLRCCLA CVLPCGSFDV IRIVHLSGHI EEYTRPVTAG EVIAAHPNHV LSRPCSQGGA RRILIVAPDS ELKRGYFYFL VPASSVPEKK RRPRQPQPQP
101: QQKKAQSQKT TAPPSAAVAK EAKDSGDRYL AEVLSEGKAS LRRRRSSRST VWRPHLQSIL EETANDL
101: QQKKAQSQKT TAPPSAAVAK EAKDSGDRYL AEVLSEGKAS LRRRRSSRST VWRPHLQSIL EETANDL
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.