Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95013 | Sorghum | extracellular, vacuole | 79.5 | 76.65 |
| TraesCS4D01G190800.1 | Wheat | extracellular | 70.19 | 66.47 |
| TraesCS4B01G189400.1 | Wheat | extracellular, vacuole | 69.57 | 65.88 |
| TraesCS4A01G114800.1 | Wheat | extracellular | 69.57 | 65.12 |
| HORVU4Hr1G055090.1 | Barley | extracellular | 67.7 | 64.12 |
| Os03t0298100-00 | Rice | cytosol, extracellular | 68.32 | 61.8 |
| GSMUA_Achr5P28030_001 | Banana | cytosol, extracellular | 50.93 | 58.99 |
| GSMUA_Achr6P32750_001 | Banana | extracellular, vacuole | 50.93 | 58.16 |
| VIT_06s0004g07460.t01 | Wine grape | extracellular, golgi | 53.42 | 58.11 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 51.55 | 58.04 |
| Zm00001d009826_P001 | Maize | extracellular | 51.55 | 56.46 |
| Solyc06g007370.1.1 | Tomato | extracellular | 50.31 | 50.94 |
| CDY10237 | Canola | extracellular, golgi | 52.17 | 49.7 |
| GSMUA_Achr9P04640_001 | Banana | extracellular | 46.58 | 49.34 |
| CDY54890 | Canola | extracellular, golgi | 51.55 | 49.11 |
| KRG98199 | Soybean | extracellular | 50.31 | 49.09 |
| CDY02050 | Canola | extracellular | 48.45 | 48.75 |
| CDX97836 | Canola | extracellular | 48.45 | 48.45 |
| Bra015540.1-P | Field mustard | extracellular, golgi | 50.31 | 47.93 |
| KRH30160 | Soybean | extracellular | 49.69 | 47.9 |
| PGSC0003DMT400052957 | Potato | extracellular | 49.07 | 47.88 |
| Bra030668.1-P | Field mustard | extracellular, golgi | 48.45 | 47.56 |
| CDY24020 | Canola | extracellular | 46.58 | 47.47 |
| CDX86506 | Canola | extracellular, golgi | 49.07 | 47.02 |
| AT1G06980.1 | Thale cress | extracellular, golgi | 49.07 | 46.75 |
| Bra031549.1-P | Field mustard | extracellular, golgi | 48.45 | 46.71 |
| CDY09944 | Canola | extracellular, golgi | 48.45 | 46.71 |
| CDY15595 | Canola | extracellular, golgi | 47.2 | 46.34 |
| CDX84850 | Canola | extracellular | 45.34 | 46.2 |
| CDX84851 | Canola | extracellular | 45.34 | 46.2 |
| KRH17122 | Soybean | extracellular, golgi | 47.83 | 46.11 |
| Zm00001d039735_P001 | Maize | extracellular | 50.31 | 45.25 |
| KRH72764 | Soybean | extracellular | 47.83 | 45.03 |
| Bra018326.1-P | Field mustard | extracellular | 49.69 | 44.94 |
| AT2G30230.1 | Thale cress | extracellular | 49.07 | 44.63 |
| CDY29687 | Canola | extracellular | 49.07 | 44.13 |
| Bra021621.1-P | Field mustard | extracellular | 49.07 | 44.13 |
| Bra022784.1-P | Field mustard | extracellular | 47.2 | 43.18 |
| Zm00001d038450_P001 | Maize | vacuole | 46.58 | 42.61 |
| Zm00001d012480_P001 | Maize | extracellular | 44.1 | 40.8 |
| Zm00001d043024_P001 | Maize | extracellular | 42.86 | 40.59 |
| Zm00001d043399_P001 | Maize | extracellular | 38.51 | 31.31 |
| Zm00001d012700_P001 | Maize | extracellular | 35.4 | 26.51 |
Protein Annotations
| EnsemblPlants:Zm00001d028798_P001 | EnsemblPlants:Zm00001d028798_T001 | EnsemblPlantsGene:Zm00001d028798 | EntrezGene:103634518 | InterPro:DUF4228_plant | PANTHER:PTHR33052 |
| PANTHER:PTHR33052:SF7 | PFAM:PF14009 | ProteinID:ONL97056.1 | SEG:seg | UniParc:UPI000221E777 | UniProt:A0A1D6JZP7 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:46679328..46679813
Molecular Weight (calculated)
17655.3 Da
IEP (calculated)
10.264
GRAVY (calculated)
-0.472
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSLRCCLA CVLPCGSFDV IRIVHLSGHI EEYARPVTAG EVTAAHPNHV LSRPCSQGGA RRILIVAPDS ELKRGCFYFL VPASSVPEKK RRPQPQQKKA
101: RPQKTPPPSA AVAKEAKDNG DRYLAEVLSE GKASLKRRRS SRSTVWRPHL HPILEEAASD S
101: RPQKTPPPSA AVAKEAKDNG DRYLAEVLSE GKASLKRRRS SRSTVWRPHL HPILEEAASD S
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.