Factsheet for Zm00001d043024_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03819	Sorghum	extracellular	80.0	76.84
Zm00001d012480_P001	Maize	extracellular	76.47	74.71
Os01t0826800-01	Rice	vacuole	68.24	67.84
TraesCS3B01G379600.1	Wheat	extracellular	62.35	65.03
TraesCS3A01G347700.1	Wheat	extracellular	63.53	64.29
TraesCS3D01G341300.1	Wheat	extracellular	60.0	61.45
GSMUA_Achr11P...	Banana	cytosol, extracellular	48.24	57.34
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	45.29	55.4
Zm00001d038450_P001	Maize	vacuole	54.71	52.84
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	42.94	51.77
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	44.71	51.35
Zm00001d009826_P001	Maize	extracellular	41.18	47.62
GSMUA_Achr9P04640_001	Banana	extracellular	40.59	45.39
PGSC0003DMT400052957	Potato	extracellular	42.35	43.64
CDX97836	Canola	extracellular	41.18	43.48
Zm00001d028798_P001	Maize	extracellular, vacuole	40.59	42.86
Solyc06g007370.1.1	Tomato	extracellular	40.0	42.77
AT1G06980.1	Thale cress	extracellular, golgi	42.35	42.6
CDY02050	Canola	extracellular	40.0	42.5
CDX84851	Canola	extracellular	39.41	42.41
CDX84850	Canola	extracellular	39.41	42.41
AT2G30230.1	Thale cress	extracellular	44.12	42.37
KRH17122	Soybean	extracellular, golgi	41.18	41.92
CDY29687	Canola	extracellular	44.12	41.9
CDY24020	Canola	extracellular	38.82	41.77
Bra018326.1-P	Field mustard	extracellular	43.53	41.57
Bra030668.1-P	Field mustard	extracellular, golgi	40.0	41.46
Bra015540.1-P	Field mustard	extracellular, golgi	41.18	41.42
CDY54890	Canola	extracellular, golgi	41.18	41.42
Zm00001d039735_P001	Maize	extracellular	43.53	41.34
KRH30160	Soybean	extracellular	40.59	41.32
KRH72764	Soybean	extracellular	41.18	40.94
Bra022784.1-P	Field mustard	extracellular	42.35	40.91
CDY10237	Canola	extracellular, golgi	40.59	40.83
KRG98199	Soybean	extracellular	39.41	40.61
CDY15595	Canola	extracellular, golgi	38.82	40.24
Bra021621.1-P	Field mustard	extracellular	42.35	40.22
CDY09944	Canola	extracellular, golgi	39.41	40.12
Bra031549.1-P	Field mustard	extracellular, golgi	39.41	40.12
CDX86506	Canola	extracellular, golgi	38.24	38.69
Zm00001d043399_P001	Maize	extracellular	37.06	31.82
Zm00001d012700_P001	Maize	extracellular	39.41	31.16

Protein Annotations

EMBL:EU952354	EnsemblPlants:Zm00001d043024_P001	EnsemblPlants:Zm00001d043024_T001	EnsemblPlantsGene:Zm00001d043024	EntrezGene:100274739	InterPro:DUF4228_plant
PANTHER:PTHR33052	PANTHER:PTHR33052:SF14	PFAM:PF14009	ProteinID:ONM36745.1	SEG:seg	UniParc:UPI000182B4BD
UniProt:B6SHY9	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3:+:186833798..186834310

Molecular Weight (calculated)

18159.7 Da

IEP (calculated)

10.375

GRAVY (calculated)

-0.335

Length

170 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CMVPCGALDV VRIVHLSGHV EEFSCPVAAA AVLAANPNHT LTTAWSPSGA PGCGSRKLVI VSRDSDLRRG RIYFLIPSAT LPADRRGKKQ
101: SSSSKRPARR HLRGRKSAGE DTAEQDAYLG DLLLSEKAAS SGGGHRRRRS GARVGVWRPQ LDSIVEEASD

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.