CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012480_P001	Maize	extracellular	79.1	80.46
Zm00001d043024_P001	Maize	extracellular	76.84	80.0
Os01t0826800-01	Rice	vacuole	72.88	75.44
TraesCS3B01G379600.1	Wheat	extracellular	63.28	68.71
TraesCS3D01G341300.1	Wheat	extracellular	63.84	68.07
TraesCS3A01G347700.1	Wheat	extracellular	62.15	65.48
EES18380	Sorghum	extracellular	63.28	60.22
GSMUA_Achr11P...	Banana	cytosol, extracellular	46.89	58.04
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	45.2	57.55
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	44.07	55.32
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	43.5	52.03
GSMUA_Achr9P04640_001	Banana	extracellular	38.98	45.39
EES17778	Sorghum	extracellular, golgi	42.94	44.19
Bra015540.1-P	Field mustard	extracellular, golgi	41.81	43.79
CDY09944	Canola	extracellular, golgi	41.24	43.71
KRH17122	Soybean	extracellular, golgi	41.24	43.71
EER95013	Sorghum	extracellular, vacuole	41.24	43.71
CDX84851	Canola	extracellular	38.98	43.67
CDX84850	Canola	extracellular	38.98	43.67
Solyc06g007370.1.1	Tomato	extracellular	38.98	43.4
Bra031549.1-P	Field mustard	extracellular, golgi	40.68	43.11
KRG98199	Soybean	extracellular	40.11	43.03
CDX97836	Canola	extracellular	38.98	42.86
KRH72764	Soybean	extracellular	41.24	42.69
CDY02050	Canola	extracellular	38.42	42.5
CDY24020	Canola	extracellular	37.85	42.41
AT2G30230.1	Thale cress	extracellular	42.37	42.37
CDX86506	Canola	extracellular, golgi	40.11	42.26
CDY15595	Canola	extracellular, golgi	38.98	42.07
Bra022784.1-P	Field mustard	extracellular	41.81	42.05
CDY54890	Canola	extracellular, golgi	40.11	42.01
AT1G06980.1	Thale cress	extracellular, golgi	40.11	42.01
KRH30160	Soybean	extracellular	39.55	41.92
PGSC0003DMT400052957	Potato	extracellular	38.98	41.82
Bra018326.1-P	Field mustard	extracellular	41.81	41.57
Bra030668.1-P	Field mustard	extracellular, golgi	38.42	41.46
CDY10237	Canola	extracellular, golgi	39.55	41.42
CDY29687	Canola	extracellular	41.81	41.34
EES02407	Sorghum	extracellular, golgi, plasma membrane	41.24	39.67
Bra021621.1-P	Field mustard	extracellular	40.11	39.66
EES03643	Sorghum	endoplasmic reticulum, extracellular	37.85	32.21

Protein Annotations

EnsemblPlants:EES03819	EnsemblPlantsGene:SORBI_3003G341200	EntrezGene:8057731	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF14
PFAM:PF14009	ProteinID:EES03819	ProteinID:EES03819.1	RefSeq:XP_002458699.1	SEG:seg	UniParc:UPI0001A8580B
UniProt:C5XNW6	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:66398055..66399537

Molecular Weight (calculated)

18820.3 Da

IEP (calculated)

10.520

GRAVY (calculated)

-0.487

Length

177 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CMVPCGALDV VRIVHLSGHV DEFSCPVAAA TVLAANPNHT LTTAWSPSGA PGCGGRKLVI VSPDSELKRG RIYFLIPSAT LPADRRSGKK
101: QNSSSKKSSS SGSKRPSRRH GAKKSAGDTA EQDNYLRELL SEKTASSGGG HHRRRRSGAR VGVWRPQLES IVEEASD

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.