Factsheet for GSMUA_Achr9P04640_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	56.58	61.87
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	57.24	61.7
GSMUA_Achr11P...	Banana	cytosol, extracellular	55.26	58.74
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	55.92	58.22
GSMUA_Achr11P...	Banana	cytosol	53.29	48.8
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	47.37	48.65
Zm00001d028798_P001	Maize	extracellular, vacuole	49.34	46.58
Zm00001d009826_P001	Maize	extracellular	44.74	46.26
EER95013	Sorghum	extracellular, vacuole	49.34	44.91
TraesCS1B01G131700.1	Wheat	extracellular	50.0	44.71
TraesCS1A01G111500.1	Wheat	extracellular	50.0	44.71
TraesCS1D01G112900.1	Wheat	extracellular	49.34	44.12
HORVU4Hr1G055090.1	Barley	extracellular	49.34	44.12
Os03t0298100-00	Rice	cytosol, extracellular	50.66	43.26
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	48.03	42.94
KRH30160	Soybean	extracellular	46.71	42.52
TraesCS4A01G114800.1	Wheat	extracellular	48.03	42.44
TraesCS4D01G190800.1	Wheat	extracellular	47.37	42.35
CDY09944	Canola	extracellular, golgi	46.05	41.92
Bra031549.1-P	Field mustard	extracellular, golgi	46.05	41.92
KRH17122	Soybean	extracellular, golgi	46.05	41.92
KRG98199	Soybean	extracellular	45.39	41.82
Solyc06g007370.1.1	Tomato	extracellular	43.42	41.51
CDY54890	Canola	extracellular, golgi	46.05	41.42
Bra030668.1-P	Field mustard	extracellular, golgi	44.08	40.85
AT1G06980.1	Thale cress	extracellular, golgi	45.39	40.83
CDY02050	Canola	extracellular	42.76	40.62
PGSC0003DMT400052957	Potato	extracellular	44.08	40.61
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	45.39	40.59
Os05t0165200-00	Rice	extracellular	45.39	40.59
Zm00001d043024_P001	Maize	extracellular	45.39	40.59
CDX86506	Canola	extracellular, golgi	44.74	40.48
CDX97836	Canola	extracellular	42.76	40.37
CDY15595	Canola	extracellular, golgi	43.42	40.24
Bra015540.1-P	Field mustard	extracellular, golgi	44.74	40.24
CDY10237	Canola	extracellular, golgi	44.74	40.24
CDX84851	Canola	extracellular	41.45	39.87
CDX84850	Canola	extracellular	41.45	39.87
KRH72764	Soybean	extracellular	44.74	39.77
Zm00001d012480_P001	Maize	extracellular	45.39	39.66
EES17778	Sorghum	extracellular, golgi	44.74	39.53
CDY24020	Canola	extracellular	40.79	39.24
Os05t0474700-01	Rice	extracellular	44.08	39.18
EES03819	Sorghum	extracellular	45.39	38.98
TraesCS3A01G098800.1	Wheat	extracellular	43.42	38.82
Bra018326.1-P	Field mustard	extracellular	45.39	38.76
Os01t0826800-01	Rice	vacuole	43.42	38.6
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	44.74	38.42
TraesCS1D01G292900.1	Wheat	extracellular	44.08	38.29
TraesCS3D01G099200.1	Wheat	extracellular	42.11	38.1
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	44.08	37.85
TraesCS3A01G347700.1	Wheat	extracellular	41.45	37.5
Zm00001d038450_P001	Maize	vacuole	43.42	37.5
CDY29687	Canola	extracellular	44.08	37.43
Bra021621.1-P	Field mustard	extracellular	44.08	37.43
AT2G30230.1	Thale cress	extracellular	43.42	37.29
EES02407	Sorghum	extracellular, golgi, plasma membrane	44.74	36.96
Bra022784.1-P	Field mustard	extracellular	42.76	36.93
Zm00001d039735_P001	Maize	extracellular	43.42	36.87
TraesCS3B01G115000.1	Wheat	extracellular	40.79	36.69
TraesCS3B01G379600.1	Wheat	extracellular	38.82	36.2
GSMUA_Achr4P08040_001	Banana	extracellular	40.13	36.09
GSMUA_Achr6P26830_001	Banana	cytosol, endoplasmic reticulum, plastid	38.82	35.76
TraesCS3D01G341300.1	Wheat	extracellular	38.82	35.54
EES18380	Sorghum	extracellular	43.42	35.48
GSMUA_Achr6P22730_001	Banana	cytosol	38.16	35.15
GSMUA_Achr7P25280_001	Banana	extracellular	34.87	30.46
Os04t0630700-01	Rice	cytosol	15.13	21.3

Protein Annotations

EnsemblPlants:GSMUA_Achr9P04640_001	EnsemblPlants:GSMUA_Achr9T04640_001	EnsemblPlantsGene:GSMUA_Achr9G04640_001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26
PFAM:PF14009	UniParc:UPI0002964B07	UniProt:M0TXH3	MapMan:35.2	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G04640_001]

Coordinates

chr9:+:3046795..3047253

Molecular Weight (calculated)

17090.5 Da

IEP (calculated)

10.155

GRAVY (calculated)

-0.651

Length

152 amino acids

Sequence
(BLAST)

001: MGNNLRCCLA CVLPCGAFDV VRVVHLDGQV EEYYSRRHVS AGEIMAANPD HFLTRPCSQG VARRTLVVPA ESQLKRGHIY FLVPTSTSPT QRKQKKSDRR
101: EKPAKNAPSI DVAPSEDHGC LAAEKKPRLR RRWSGRVGAW RPRLESVRED DS

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.