Factsheet for Zm00001d038450_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0474700-01	Rice	extracellular	65.91	67.84
EES18380	Sorghum	extracellular	70.45	66.67
TraesCS1D01G292900.1	Wheat	extracellular	64.2	64.57
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	64.2	63.84
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	63.64	63.28
Zm00001d012480_P001	Maize	extracellular	56.25	56.9
GSMUA_Achr11P...	Banana	cytosol, extracellular	44.89	55.24
Zm00001d043024_P001	Maize	extracellular	52.84	54.71
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	43.75	52.03
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	41.48	51.77
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	40.34	51.08
Zm00001d028798_P001	Maize	extracellular, vacuole	42.61	46.58
Zm00001d009826_P001	Maize	extracellular	38.07	45.58
KRH17122	Soybean	extracellular, golgi	42.05	44.31
GSMUA_Achr9P04640_001	Banana	extracellular	37.5	43.42
CDX97836	Canola	extracellular	39.2	42.86
KRH72764	Soybean	extracellular	40.91	42.11
PGSC0003DMT400052957	Potato	extracellular	39.2	41.82
KRG98199	Soybean	extracellular	39.2	41.82
CDX84851	Canola	extracellular	37.5	41.77
CDX84850	Canola	extracellular	37.5	41.77
CDY10237	Canola	extracellular, golgi	39.77	41.42
CDY54890	Canola	extracellular, golgi	39.77	41.42
AT1G06980.1	Thale cress	extracellular, golgi	39.77	41.42
KRH30160	Soybean	extracellular	39.2	41.32
CDY24020	Canola	extracellular	36.93	41.14
Bra022784.1-P	Field mustard	extracellular	40.91	40.91
AT2G30230.1	Thale cress	extracellular	40.91	40.68
CDY02050	Canola	extracellular	36.93	40.62
Solyc06g007370.1.1	Tomato	extracellular	36.36	40.25
Bra015540.1-P	Field mustard	extracellular, golgi	38.64	40.24
CDY29687	Canola	extracellular	40.91	40.22
Bra021621.1-P	Field mustard	extracellular	40.91	40.22
CDY09944	Canola	extracellular, golgi	38.07	40.12
Bra031549.1-P	Field mustard	extracellular, golgi	38.07	40.12
Bra030668.1-P	Field mustard	extracellular, golgi	36.93	39.63
CDY15595	Canola	extracellular, golgi	36.36	39.02
Bra018326.1-P	Field mustard	extracellular	39.2	38.76
Zm00001d039735_P001	Maize	extracellular	39.2	38.55
CDX86506	Canola	extracellular, golgi	36.36	38.1
Zm00001d043399_P001	Maize	extracellular	35.23	31.31
Zm00001d012700_P001	Maize	extracellular	35.8	29.3

Protein Annotations

EnsemblPlants:Zm00001d038450_P001	EnsemblPlants:Zm00001d038450_T001	EnsemblPlantsGene:Zm00001d038450	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF16
PFAM:PF14009	ProteinID:AQK86651.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0002212CBC	UniProt:A0A1D6M6E5
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:157437621..157438151

Molecular Weight (calculated)

18860.6 Da

IEP (calculated)

10.458

GRAVY (calculated)

-0.331

Length

176 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CMLPCGALDV VRVVHLSGRV DELGCPLTAA DVLAAHPSHA LTDAWSAAGA ARKVVVLAPD SELKRGRIYF LVPSSACSTP AAAAADERTK
101: KRRSRASSRK KHGHRKGGGA SVAPSLMSAA EQDNYLRELL SEKREASLVS HRRRRSGARP GVWRPRLESI AEEPSE

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.