Factsheet for GSMUA_Achr6P32750_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	69.5	70.5
GSMUA_Achr11P...	Banana	cytosol, extracellular	68.79	67.83
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	65.96	62.84
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	63.12	60.96
GSMUA_Achr9P04640_001	Banana	extracellular	61.7	57.24
Zm00001d009826_P001	Maize	extracellular	58.87	56.46
GSMUA_Achr11P...	Banana	cytosol	63.83	54.22
KRH30160	Soybean	extracellular	63.83	53.89
TraesCS1D01G112900.1	Wheat	extracellular	63.83	52.94
KRG98199	Soybean	extracellular	61.7	52.73
CDY02050	Canola	extracellular	59.57	52.5
TraesCS1A01G111500.1	Wheat	extracellular	63.12	52.35
TraesCS1B01G131700.1	Wheat	extracellular	63.12	52.35
Solyc06g007370.1.1	Tomato	extracellular	58.16	51.57
CDX97836	Canola	extracellular	58.87	51.55
CDY54890	Canola	extracellular, golgi	61.7	51.48
AT1G06980.1	Thale cress	extracellular, golgi	61.7	51.48
Bra015540.1-P	Field mustard	extracellular, golgi	61.7	51.48
Zm00001d028798_P001	Maize	extracellular, vacuole	58.16	50.93
Bra031549.1-P	Field mustard	extracellular, golgi	60.28	50.9
CDY10237	Canola	extracellular, golgi	60.99	50.89
CDY24020	Canola	extracellular	56.74	50.63
Bra030668.1-P	Field mustard	extracellular, golgi	58.87	50.61
EES17778	Sorghum	extracellular, golgi	61.7	50.58
KRH17122	Soybean	extracellular, golgi	59.57	50.3
CDY09944	Canola	extracellular, golgi	59.57	50.3
CDX84850	Canola	extracellular	56.03	50.0
Os05t0165200-00	Rice	extracellular	60.28	50.0
CDX84851	Canola	extracellular	56.03	50.0
CDY15595	Canola	extracellular, golgi	58.16	50.0
PGSC0003DMT400052957	Potato	extracellular	58.16	49.7
EER95013	Sorghum	extracellular, vacuole	58.16	49.1
Bra018326.1-P	Field mustard	extracellular	61.7	48.88
KRH72764	Soybean	extracellular	58.87	48.54
CDX86506	Canola	extracellular, golgi	57.45	48.21
CDY29687	Canola	extracellular	60.28	47.49
AT2G30230.1	Thale cress	extracellular	59.57	47.46
Os01t0826800-01	Rice	vacuole	57.45	47.37
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	56.74	47.06
TraesCS4D01G190800.1	Wheat	extracellular	56.74	47.06
Bra021621.1-P	Field mustard	extracellular	59.57	46.93
Os03t0298100-00	Rice	cytosol, extracellular	58.87	46.63
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	56.03	46.47
Bra022784.1-P	Field mustard	extracellular	57.45	46.02
HORVU4Hr1G055090.1	Barley	extracellular	55.32	45.88
Zm00001d039735_P001	Maize	extracellular	58.16	45.81
TraesCS3B01G115000.1	Wheat	extracellular	54.61	45.56
TraesCS4A01G114800.1	Wheat	extracellular	55.32	45.35
Os05t0474700-01	Rice	extracellular	54.61	45.03
TraesCS3A01G098800.1	Wheat	extracellular	53.9	44.71
TraesCS3D01G099200.1	Wheat	extracellular	53.19	44.64
EES02407	Sorghum	extracellular, golgi, plasma membrane	58.16	44.57
TraesCS3B01G379600.1	Wheat	extracellular	51.06	44.17
EES03819	Sorghum	extracellular	55.32	44.07
TraesCS1D01G292900.1	Wheat	extracellular	53.9	43.43
Zm00001d012480_P001	Maize	extracellular	53.19	43.1
Zm00001d043024_P001	Maize	extracellular	51.77	42.94
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	53.9	42.94
TraesCS3A01G347700.1	Wheat	extracellular	51.06	42.86
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	53.19	42.37
EES18380	Sorghum	extracellular	55.32	41.94
GSMUA_Achr6P22730_001	Banana	cytosol	48.94	41.82
TraesCS3D01G341300.1	Wheat	extracellular	48.94	41.57
Zm00001d038450_P001	Maize	vacuole	51.77	41.48
GSMUA_Achr6P26830_001	Banana	cytosol, endoplasmic reticulum, plastid	47.52	40.61
GSMUA_Achr4P08040_001	Banana	extracellular	46.1	38.46
GSMUA_Achr7P25280_001	Banana	extracellular	44.68	36.21
Os04t0630700-01	Rice	cytosol	21.28	27.78

Protein Annotations

EnsemblPlants:GSMUA_Achr6P32750_001	EnsemblPlants:GSMUA_Achr6T32750_001	EnsemblPlantsGene:GSMUA_Achr6G32750_001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26
PFAM:PF14009	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0002957B95	UniProt:M0TC69	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G32750_001]

Coordinates

chr6:-:32004627..32005052

Molecular Weight (calculated)

15716.9 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.486

Length

141 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDV VRVVHLSGQV EEYSRHVTAG EILAANPDHV LSKPCSSQGV VRRILIVSPE SELKRGDIYF LIPTSTLPDQ KKSSDDKRKK
101: HAGNTRTTEI LAEKKQPSHR RHRSGRVGVW RPHLERICED S

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.